Yersinia intermedia: CH53_1867
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Entry
CH53_1867 CDS
T03608
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
yin
Yersinia intermedia
Pathway
yin00540
Lipopolysaccharide biosynthesis
yin01100
Metabolic pathways
yin01250
Biosynthesis of nucleotide sugars
Module
yin_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CH53_1867 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yin01005
]
CH53_1867 (rfaD)
Enzymes [BR:
yin01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CH53_1867 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
yin01005
]
Core region
CH53_1867 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
adh_short
Motif
Other DBs
NCBI-ProteinID:
AJJ20951
UniProt:
A0A0T9MQJ6
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All DBs
Position
complement(2115913..2116845)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNNIGYKDILVVDNLKDGTKFVNLVDLDIADYMDKEDFVASI
VAGDDMGEIEAIFHEGACSSTTEWDGKYMMDNNYQYSKDILHFCLDRGIPFLYASSAATY
GGRTDNFIEDRQYEQPLNVYGYSKFLFDQYVREILPQADSQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINAGENPKLFSGSENFKRDFIYVGDVADVNLWFWQNNVSGIFNCGTGRA
ESFQAVADAVVDFHHSGPVEYIEFPEKLKGRYQAYTQADLTKLRAAGYDKPFKTVAEGVK
EYLAWLNRSV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcactggcggcgccggtttcattggcagcaacatcgttaaggcactgaat
aatatcggttataaagatattctggttgttgataacctgaaagacggcactaaattcgtc
aatttggttgatctggatatcgctgattacatggataaagaagattttgttgccagcatt
gttgccggtgatgatatgggtgagatcgaagccattttccatgagggtgcctgttcttcc
accaccgagtgggatggcaagtacatgatggataacaactatcaatactctaaagatatc
ctgcacttctgtctggatcgcggcattccgttcttatatgcctcttctgctgccacgtat
ggcgggcgtaccgataatttcatcgaagatcgccagtacgaacaaccactcaacgtttat
ggttattccaaattcttgtttgatcagtatgtgcgcgagattctgccgcaagctgattcg
cagatttgtggtttccgttatttcaacgtttatggtccacgtgaaggccacaaaggtagc
atggcaagcgttgccttccacttgaataaccagatcaacgcaggtgagaatcctaaactc
ttctccggcagtgaaaacttcaaacgcgatttcatctatgtgggtgatgtggctgacgtt
aacctgtggttctggcaaaacaatgtttccggcattttcaactgtggtaccgggcgcgca
gaatctttccaggctgttgccgatgccgtagtagacttccaccatagtgggccagtggaa
tacattgaattccctgaaaagttgaaaggccgttatcaggcatacacccaagctgacctc
accaagctgcgtgctgctggttacgacaagccgttcaaaacagtcgctgaaggcgtcaaa
gaatatctggcctggctcaatcgctcagtctaa
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