Yersinia intermedia: CH53_2071
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Entry
CH53_2071 CDS
T03608
Symbol
fadB
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
yin
Yersinia intermedia
Pathway
yin00071
Fatty acid degradation
yin00280
Valine, leucine and isoleucine degradation
yin00310
Lysine degradation
yin00362
Benzoate degradation
yin00380
Tryptophan metabolism
yin00410
beta-Alanine metabolism
yin00640
Propanoate metabolism
yin00650
Butanoate metabolism
yin00907
Pinene, camphor and geraniol degradation
yin00930
Caprolactam degradation
yin01100
Metabolic pathways
yin01110
Biosynthesis of secondary metabolites
yin01120
Microbial metabolism in diverse environments
yin01200
Carbon metabolism
yin01212
Fatty acid metabolism
Module
yin_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CH53_2071 (fadB)
00650 Butanoate metabolism
CH53_2071 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CH53_2071 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CH53_2071 (fadB)
00310 Lysine degradation
CH53_2071 (fadB)
00380 Tryptophan metabolism
CH53_2071 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CH53_2071 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CH53_2071 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CH53_2071 (fadB)
00930 Caprolactam degradation
CH53_2071 (fadB)
Enzymes [BR:
yin01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CH53_2071 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CH53_2071 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CH53_2071 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CH53_2071 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AJJ19363
LinkDB
All DBs
Position
complement(2337431..2339620)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQSETLQLHWLDNGIAELVFDAPGSVNKLDTKTVANLGEALAVLEKQSELKGLLLRSA
KAAFIVGADITEFLSLFNAPPEKLHQWLVFANDIFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRVASPETRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVSAAEALK
IGLVDAVVAPEKLADAALIMLKQAIDGKLDWKAARQPKLDPLKLNSTEAAMCFTIAKGMV
MQVAGKHYPAPLVAVKTIEAAAKLGRAEALKLETNSFVPLAGSNEARALVGIFLNDQFVK
GQAKKLSKGVSAPTQAAVLGAGIMGGGIAYQSALKGVPVIMKDINDKSLALGMNEAAKLL
NKQLERGKVDGLKMANILATIQPTLNYSGIERAQVIVEAVVENPKIKAAVLAEAEALIGE
DTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGSKTSDKTIAAVVAY
ATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAVGFPERMNKDYRDAVDVMFDNQRFGQKNGQGFYRYTQDAKGKP
RKENDEIVDNLLATVSQPIQKFSDDDIIARTMIPMINEVVRCLEEGIIASPAEGDMALVY
GLGFPPFHGGVFRYLDTIGSTNYVEMAQRYAHLGALYQVPAGLRAKAEHNESYYPVAAAL
LDVSTSQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaagcgaaacactacagcttcactggttggacaacggcattgccgagttg
gtgtttgatgcaccgggttcagtaaataagctggatactaaaactgtagccaatctgggt
gaagccctggcggtgttagagaaacaaagcgaactcaaagggttgctgttgcgttctgcc
aaagcggcctttattgtcggtgccgatatcaccgagtttttatccctgtttaatgcccca
ccagaaaagctgcaccagtggttggtttttgctaatgatattttcaaccgtctggaagac
ttaccagtcccgaccatttctgcaatcaatggatatgcattaggtggtggatgtgaatgt
attctggccacagatttccgtgttgcctccccagaaacacggatcggcttgccggaaacc
aagttgggcatcatgcccggctttggcggttcagttcgtttaccgcgtttgttaggtgca
gacagcgcattagaaatcattgccgctggcaaagacgtgagtgctgctgaagcattaaaa
atcggtttggttgatgctgttgtcgcccctgaaaagctggccgatgccgccctaatcatg
ctgaaacaggcgattgacggcaagctggattggaaagccgcgcgtcagccaaaacttgac
ccattaaaactcaattcaactgaagctgctatgtgctttaccatcgccaaaggtatggtg
atgcaagtggccgggaagcactacccagcaccactggtcgcagtaaaaacgatcgaagcc
gccgctaaacttggccgggctgaagcattgaaactggaaaccaacagttttgtcccgttg
gcaggttccaatgaagcgcgtgcgttagttgggatattcctcaacgaccaatttgttaaa
ggacaggctaaaaaactgtccaaaggtgtcagtgcaccaacacaggccgcagtactgggt
gccgggattatggggggtgggattgcctatcagtcagcgctgaaaggtgtgccagtcatt
atgaaggatattaatgacaaatctctggctctggggatgaatgaagcggccaagttactg
aataaacagttggaacgcggcaaagtggatggcctaaaaatggcaaacattttagcaact
atccaacccacgctgaattacagcggcattgagcgtgctcaggtcattgtggaagcggta
gtggaaaatcccaaaatcaaagcggcggtgctggcagaggcagaagcactgatcggtgaa
gatacggtgcttgcttctaatacctctacaatccctatcgaccaactcgcaaaatcactt
aaacgccctgagaatttctgcggtatgcacttcttcaaccccgtgcaccgcatgccattg
gttgaaatcattcgtggcagcaaaacctcagataaaaccattgctgcggtggtggcatac
gccacacaaatgggtaaaacaccaatcgtggttaatgattgcccaggcttcttcgttaac
cgcgtgttgttcccttatctggctgggtttggcatgttggttagagacggtgctgacttc
cgccaaattgataaagtgatggaaaaacagtttggctggccgatgggacctgcgtatctg
ctagatgtcgtgggtattgataccgcacaccatgcacaagccgtgatggcagttggcttc
cctgagcggatgaacaaagattatcgcgatgcggttgacgtgatgttcgataaccaacga
tttggccaaaaaaatggccaaggcttctaccgttatacccaagatgcaaaaggtaagccg
cgtaaagaaaatgacgaaatcgtggataacttgctggcaacagttagccaaccgattcag
aaattcagtgacgacgatattattgcccgcaccatgataccgatgatcaatgaagtggtg
cgatgcctggaagaaggcattattgccagcccagccgaaggtgatatggcgttggtatat
ggtcttggcttccctcctttccacgggggcgtgttccgttatcttgatactatcggcagt
acaaactatgtcgaaatggcccagcgctatgctcaccttggcgcgctgtatcaagtcccc
gcagggctgagagccaaagctgaacacaacgaaagctattatcctgtggcagcagcgctg
cttgatgtttctaccagtcaaccggcatga
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