Yersinia intermedia: CH53_2573
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Entry
CH53_2573 CDS
T03608
Name
(GenBank) beta-eliminating lyase family protein
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
yin
Yersinia intermedia
Pathway
yin00330
Arginine and proline metabolism
yin00480
Glutathione metabolism
yin01100
Metabolic pathways
yin01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
CH53_2573
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CH53_2573
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
CH53_2573
Enzymes [BR:
yin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
CH53_2573
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJJ17126
UniProt:
A0A0T9M949
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Position
2901679..2903841
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AA seq
720 aa
AA seq
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MTLLKIATSARLASYIESQRGMVYLNQTDFTDVAAVVMSVEDAKAGILSKLHDLGFAIPT
FVAVTAQQTVSADYLPLIKGIITLGEANKAFYNAQVEAAASEYQKNLLPPFFSTLKKYVE
MNNSTFACPGHQGGEFFRKHPAGRQFFEFYGETIFRSDMCNADVKLGDLLIHEGAAKDAQ
KYAAKVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPI
YLETARNPFGFIGGIDAHCFDERYLRQQLREVAPERAEEERPFRLAIIQLGTYDGTVYNA
RQVVDSIGHLCDYILFDSAWVGYEQFIPMMKDFSPLLLDLNENDPGIIVTQSVHKQQAGF
SQTSQVHKKDNHIKGQKRHCNHKRFNNAFMLHASTSPFYPLFAALDINAKIHSGDSGRRM
WMDCVKLGIDTRKLLLERCSMLRPFIPPTVGGKNWQDYDTDIIANDARFFNFVPNERWHG
FEGYNQDQYLVDPCKLLLTTPGIDANSGQYTEFGVPAAILATFLRENGIVPEKCDLNSIL
FLLTPAENPAKMAHLVDMLAQFERYVEQDALLCDVLPTIYRKNEERYRGYTLRQLCQEMH
DLYVSYDVKQLQKDMFRKASFPPVLMNPQDANIQFIRDNIELVPIAEAEGRIAAEGALPY
PPGVLCVVPGEMWGGAVQRYFLALEEGINLLPGFSPELQGVYIEKGDVEWRRIFGYVITP
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgacactattaaaaatagcaacaagcgctcgtttggcttcttatatagaaagccagcgg
ggaatggtatacctcaatcaaaccgattttactgatgttgccgctgtcgtgatgtcggtt
gaagatgcgaaggccggtatattgtcaaaattgcatgatctgggttttgctattcctact
tttgttgctgtcacggcacaacagacggtttctgctgattatttgcccctgattaagggg
attattacgctcggcgaggcaaacaaagctttttacaatgctcaggtagaagctgctgcc
agtgagtatcaaaaaaatctattaccgccatttttctcaacattgaaaaaatatgtcgag
atgaataattcaacttttgcttgcccagggcatcagggcggcgagtttttccgtaagcat
cctgccggtcgccagttttttgaattttatggcgagaccattttccgttcagatatgtgc
aatgcggacgttaaactgggtgatttattgatccatgaaggtgctgccaaggatgcacaa
aaatatgcggctaaggtcttcaatgcggataaaacttattttgttttgaatggtacgtcg
gctgctaataaggtggtaactaacgccttattgactcgcggtgatttggttctgttcgat
cgtaataaccataaatctaaccatcatggtgcgctgattcaggctggggcgacaccaatc
tatttggaaactgcccgcaatccgttcggttttattggtggtattgatgctcattgtttt
gacgagcgttatttacgccagcaattgcgtgaagttgcccccgaacgggcagaagaggag
cggccattcagattggcaatcattcagttgggtacctacgatggtacggtgtataacgca
cgtcaggtggttgatagtattggccatttgtgtgattacattctatttgattctgcgtgg
gtaggttacgaacagtttattccgatgatgaaggatttctcaccgctactgctggattta
aatgaaaatgatcctgggattatcgtgactcagtcagtgcacaagcagcaggctggtttc
tcccaaacctcgcaggtacataaaaaagataatcatatcaaagggcaaaaacggcactgt
aatcataaacgttttaataatgcatttatgttgcatgcttcaaccagcccgttctaccca
ttatttgccgcactggatattaatgccaaaattcattctggtgacagtggccgccgtatg
tggatggattgtgtcaagttgggcatcgatacccgtaaactattattagaacgctgctct
atgttgcggccatttattcctcccactgtcggcggtaaaaattggcaagattacgatacg
gatatcattgctaatgacgcacgtttctttaattttgtgcctaatgaacgttggcatgga
tttgaagggtataaccaagaccaatatctggttgatccttgtaagttattactgacgaca
ccgggtatcgatgccaacagcggccaatatactgagtttggtgttccggcagcaatattg
gctaccttcctgcgtgagaatggtattgtgccggaaaaatgcgatctgaattcgattctg
ttcttgctaactccggcagaaaatccagcaaaaatggcgcatctggttgatatgctggct
cagtttgagcgctacgtggagcaagatgctttactgtgtgatgtattaccgacgatatat
cgtaagaatgaagagcgctatcgcggctatactttacgccaactatgccaagaaatgcat
gacctctatgtcagctatgatgttaaacaactgcaaaaggatatgttccgcaaagccagc
ttcccaccggtgttaatgaacccgcaagatgccaatatccagtttatccgcgataatatc
gagcttgtccctattgccgaggctgaagggcgcattgctgctgaaggtgcactaccttat
ccgccgggcgtattgtgcgtggttccgggtgaaatgtggggtggggcggtacagcgttat
ttcctggcgttggaagagggaattaatttattgccgggcttctcgccagaattacagggc
gtttatatcgaaaaaggtgatgtagagtggcggcgtatctttggttatgtcattacgccg
taa
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