Yersinia rochesterensis: CH54_1336
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Entry
CH54_1336 CDS
T03609
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00300
Lysine biosynthesis
ykr01100
Metabolic pathways
ykr01120
Microbial metabolism in diverse environments
ykr01230
Biosynthesis of amino acids
Module
ykr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CH54_1336 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ykr01002
]
CH54_1336 (dapE)
Enzymes [BR:
ykr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CH54_1336 (dapE)
Peptidases and inhibitors [BR:
ykr01002
]
Metallo peptidases
Family M20
CH54_1336 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AJJ35929
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Position
1440798..1441925
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AA seq
375 aa
AA seq
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MICPVIDLAQQLIKRPSLSPNDAGCQEIMIQRLEAIGFTVEPMNFGDTLNFWAWRGEGKT
LAFAGHTDVVPTGDESHWNSPPFEPTIRDGMLYGRGAADMKGSLAAMVVAAERFVAAHPN
HQGRLAFMITSDEEAKAINGTVKVVNALMARHERLDYCLVGEPSSTDRVGDVVKNGRRGS
ITANLHIHGVQGHVAYPHLADNPVHRAMPALNELVATQWDEGNEFFPATSMQIANLHAGT
GSNNVIPGEFYVQFNFRFSTELTDSMIKQRVEALLDSYQLNYTLEWVLSGQPFLTARGAL
VDAVVNAVEHYAEITPQLLTTGGTSDGRFIALMGAQVVELGPVNATIHKVNECVHAADLQ
LLSRMYQRIMEQLIA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgatctgtccggtaatcgacctggcccaacaattgattaaacgcccgtcgctcagccca
aatgatgcgggctgccaggagatcatgattcagcgcttagaggctatcggctttactgtc
gagccgatgaattttggtgatacccttaatttctgggcatggcgtggcgaaggtaaaaca
ctggcgtttgccggccataccgacgtggttcctaccggcgatgaaagccactggaacagc
ccgccatttgaaccgaccatccgcgatggcatgctgtatggtcggggtgccgccgatatg
aaaggttcgctggcagccatggtagttgcggcagagcgctttgttgccgcacaccctaat
catcaaggccggttggcatttatgattacctccgatgaggaagccaaagccattaatggc
accgttaaagtggttaacgccctgatggcgcgtcatgagcggctggattattgtctggtg
ggtgagccatccagcaccgaccgcgtcggtgatgtggtgaaaaatggccgccgcggttca
atcaccgccaacttgcatatccatggtgttcaagggcacgtggcttatcctcatttggct
gacaacccggttcaccgcgcgatgcccgccctgaatgagctggttgccacgcaatgggat
gaaggcaatgagtttttccccgctaccagtatgcaaatcgccaatttgcatgccggaacg
ggcagtaataacgtgatccccggtgagttctatgtgcagtttaacttccgctttagcact
gaactgactgacagcatgattaagcagcgagttgaagctttgctagacagctatcaactc
aattacaccctcgaatgggtattatctggccagccattcctgaccgcccgtggcgcattg
gtggatgccgtggtcaacgccgtcgaacattatgctgaaattacgccacaattattgacc
accggtggcacctccgatggccgctttattgccttaatgggcgcgcaggtggttgagctg
gggccggtcaatgccacgatccataaagtgaatgaatgcgttcacgccgctgatttacaa
ctgctcagccgaatgtatcagagaatcatggagcaactcatcgcatga
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