Yersinia massiliensis: DA391_17010
Help
Entry
DA391_17010 CDS
T05402
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
yma
Yersinia massiliensis
Pathway
yma00730
Thiamine metabolism
yma01100
Metabolic pathways
yma01240
Biosynthesis of cofactors
yma04122
Sulfur relay system
Module
yma_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DA391_17010
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DA391_17010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yma03016
]
DA391_17010
Enzymes [BR:
yma01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
DA391_17010
Transfer RNA biogenesis [BR:
yma03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DA391_17010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AVX39220
LinkDB
All DBs
Position
complement(3633393..3634844)
Genome browser
AA seq
483 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTTNIRNVLKNLEDDSLAVVRHWDHIEIRTKDDQL
GPQICDALTRVPGIHHILEVEDRSYTDMHDIFEQTLEAYRETLIGKTFCVRVKRRGKHEF
TSGDAERYVGGGLNQHIESAKVKLTHPQVTVHLEIDQDKLTLIKARHEGLGGFPIGTQED
VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGSAHEIGVKQVAHYLWNRFGSSHRVRF
VAIDFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQALVTGEALGQVSSQTLT
NLRLIDNASDTLILRPLISHDKEHIINVARKIGTEDFAKTMPEFCGVISKSPTVKAVKAK
IEEEESHFDFAILDRVVSEAKNVDIREIAEQSREQVVEVETVAELAESDVLLDIRAPDEQ
EEKPLKLEKVTVKALPFYKLGSQFADLDQSKTYLLYCDRGVMSRLQALYLREQGYTNVKV
YRP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccagaaattaccatcaagagtcaatcagtacgattg
cgcttcattaaaattctcaccacaaatatccgcaacgtactgaaaaatcttgaggatgat
agcctagcggttgttcgtcattgggatcatattgaaattcgcactaaagatgatcaactg
ggtccgcaaatctgtgatgcactgactcgcgtaccggggattcaccatatcctcgaagtt
gaagatcgtagctataccgatatgcacgatatttttgagcaaacgctggaagcctatcgt
gagactctgatcgggaaaaccttctgcgtgcgagtgaaacgccgtggtaaacatgaattt
acgtctggtgatgcagagcgatatgttggtggtggtttaaatcaacatattgaaagcgca
aaagtaaaactgactcatcctcaagtcacggtgcatttggaaatcgaccaagacaaactg
acgctgatcaaagcgcgtcatgaaggtttgggcggtttccctatcggtacgcaggaagat
gttttatctttaatttcaggtggtttcgactcaggtgtgtctagctatatgctgatgcgc
cgtggctgccgagtacactattgcttctttaatctcggtggttcggcccatgagattggg
gtgaagcaagttgcacattacctgtggaatcgctttggtagctcccatcgagtgcgtttt
gtggcgatcgatttcgagccggtagtgggcgaaattctggagaaagtcgaagacgggcag
atgggtgtcgttttgaaacgtatgatggtgcgagcagcatctcaggttgccgaacgttac
ggtgttcaggcactggtcactggtgaagcgctggggcaggtatccagtcagacactaacc
aatttacgcttaattgataatgcctcagatacgctgattctacgtccgctgatttctcat
gataaagaacacattatcaatgtagctcgaaaaattggtactgaagatttcgcgaaaacg
atgccggaattttgtggtgtgatttcaaagagcccaaccgtgaaagcggttaaggcgaag
atcgaagaggaagaatctcacttcgatttcgctattttagatcgcgtcgtcagcgaagct
aaaaacgtcgatattcgtgaaattgcggagcaaagccgcgagcaagtggtggaagtcgaa
accgttgctgagttggcggaaagcgatgtattgctggatatccgtgcgccagatgagcag
gaagagaaaccgttgaaactcgaaaaagtgacggtaaaagcgctaccgttctataagtta
ggctcgcaattcgccgatctggatcaaagtaaaacatacttgttgtattgcgatcgtggc
gtgatgagccgtttgcaggcgctttatctgcgtgagcaagggtataccaatgtgaaagtg
taccgcccttag
DBGET
integrated database retrieval system
