Yersinia massiliensis: DA391_22665
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Entry
DA391_22665 CDS
T05402
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
yma
Yersinia massiliensis
Pathway
yma02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DA391_22665
Enzymes [BR:
yma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
DA391_22665
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
RIP
PAS_4
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AVX40184
UniProt:
A0A2R4NVM8
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All DBs
Position
4878502..4880496
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AA seq
664 aa
AA seq
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MFEDQDTSILNTYFGTHSPFWRLAFDSQALELSAIKGTTIIAIPLNSVQTMKIRSLTGIT
ASLDVEIKIYGHPLHLHLVGRKINDKEWGGTASAYADTESVARDLVVGLSFAEQVVSEAN
SVIVILDKEGCVQRFNHLSEEYTGKKEQDVIGKNVYDLFMTAKEGASSRKNIEGFFQRGA
SYEVERWVNTVKGKRLFLFRNKFVHSGSGKNERYLICSGTDITKERRAQERLRILANTDM
ITGLPNRHAIHERINSAIQTRGETSVGIIYLDLDNFKKVNDHYGHMFGDRLLKDVSLAIL
GCLGENEMLARLGGDEFIVLVENARMSELETTTQRILNRMKAPFRVGLIEVYTGCSIGIA
LCPEHGDTLENIIRSADTAMYTAKEHGKRTYSIFSQEMNKKVSEYVWLDTNLRKGLEQHQ
LQVFYQPKISTQTGKVHSVEALVRWLSPERGLIAPLMFISYAEESGLIGPLGKWVLQTSM
QQAVDWKKRGINLRVAVNVSARQLIDEAIVTSFRESLEASNLEYSLVDVELTESCLIDDE
DAAINIMKQLRHLGAQVHLDDFGTGYSSLSQLARIPIDAIKLDQSFVRDIDNNPISQSLV
RAIIVVAEALKMRVIAEGVETKGEEMFLDSIGIDEKQGFLYAKPMLADELEHWLVTQHPH
LLQD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaagaccaagacacatcgatcctcaatacctattttggtacccacagtcctttt
tggcgacttgctttcgatagccaagctttagagttatcagcaattaaagggacgactatt
attgcgattcctctcaattcagttcaaacaatgaaaatccggagtttaaccggtattacc
gccagtttagatgtcgaaattaagatttacggacacccgcttcacttacacctcgttggc
cgcaaaattaatgacaaagaatggggagggacggcatctgcttatgctgataccgagtct
gtcgcacgcgatttagtggtagggctttcttttgctgaacaggtcgtttctgaagcaaat
tcagtgatcgttattcttgataaagaaggctgcgtccaacgtttcaatcatctaagcgaa
gaatataccgggaaaaaagaacaagatgtaattggcaaaaatgtctatgacttgtttatg
accgctaaagaaggggcatcatcccgtaagaatattgaaggcttcttccagcgcggtgcg
tcttatgaagttgaacgttgggtcaataccgttaaagggaagcgcctattcctatttcgt
aataaatttgttcacagcggtagtggtaagaatgaacgttaccttatctgttcgggtaca
gacataacaaaagagagacgtgctcaagaacgcctccggattttagcgaataccgatatg
attacgggtcttcctaaccgccatgctattcatgagcgcattaatagcgcgatccaaact
cgtggtgaaacttcggtcggtattatttatctcgatctcgataactttaaaaaagtaaat
gaccattatggccatatgtttggtgacagattacttaaagacgtctcgctggctatttta
ggttgcttgggtgagaacgaaatgcttgcccgacttggcggtgatgagtttattgttcta
gtcgaaaatgcccgcatgagtgagttagaaacgacaacacagcgtattcttaatcgcatg
aaagcgccttttagagtcggcttgatcgaggtttatacgggatgctccattggcattgca
ttatgtccagagcatggcgatacgctggaaaatattattcgcagtgcagacactgccatg
tataccgcaaaagaacatggtaagcgtacctactcaatcttttcacaagaaatgaataaa
aaagtatctgagtatgtttggctagataccaatttgcgtaaaggcttagaacagcatcaa
ttacaagtcttttatcaacccaaaatatcgactcaaaccggtaaagtgcacagtgtggaa
gccttagtgagatggctctcacctgaacgtggtttaatcgcccctctgatgtttatttcc
tatgcggaagaatctgggttaatagggccactgggtaaatgggttctacaaacctcaatg
caacaagctgtagattggaaaaagcggggaattaatctgcgagttgccgttaatgtctct
gctcggcaattaattgatgaggcaatcgtcaccagttttagggaatcactagaagcaagc
aatctagaatatagcttggtggatgtagaattaaccgaaagttgcttgatcgatgatgaa
gatgcggctatcaacatcatgaaacaattacgtcacttaggtgcacaggttcatttggat
gacttcggcaccggttattcttcgctttcccaattggcacgtattcccattgatgccatt
aagttggatcaaagctttgttcgcgacatcgataataatcctatttcacaatcactggtt
cgagccattattgtggttgcggaagcgcttaaaatgcgggtcattgccgaaggggtggag
acaaaaggtgaagagatgttcttggattcgattggtattgatgaaaaacaaggatttctt
tacgccaaaccaatgctcgcagatgaactggagcattggctggtcacgcaacaccctcac
cttttacaagattag
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