Yersinia pestis D106004: YPD4_0678
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Entry
YPD4_0678 CDS
T01832
Name
(GenBank) putative siderophore biosysnthesis protein
KO
K12240
L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:
6.2.1.69
]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd01053
Biosynthesis of siderophore group nonribosomal peptides
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
01053 Biosynthesis of siderophore group nonribosomal peptides
YPD4_0678
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
ypd01008
]
YPD4_0678
Enzymes [BR:
ypd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.69 L-cysteine---[L-cysteinyl-carrier protein] ligase
YPD4_0678
Polyketide biosynthesis proteins [BR:
ypd01008
]
Nonribosomal peptide synthetase (NRPS)
Nonlinear NRPS
Pyochelin synthetase
YPD4_0678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
Methyltransf_12
Thioesterase
TubC_N
Methyltransf_11
Methyltransf_25
Methyltransf_31
Methyltransf_23
PP-binding
AMP-binding_C
Ubie_methyltran
Abhydrolase_1
Abhydrolase_6
DLH
MauJ
Motif
Other DBs
NCBI-ProteinID:
ACY57587
LinkDB
All DBs
Position
complement(840999..846791)
Genome browser
AA seq
1930 aa
AA seq
DB search
MNINLDSSSATQATDLLVNLEQQEVRFWLEGERIKFRAPEGVMTGAVMASLKALKPQLVA
ILAVREQQETLPIDTENRFVAFPLSHVQAAYFVGRQSVFEYGGVGCHGYFEILAPCWDKA
KLECIWEQMIIRHDMLRAIITPNGEQRILPSVAPFVIEQVDVSSETVRQAMSHRVYQTDK
WPLFDLKISHQNGKDCLHFSIDLLIADFLSVQILLAELFKGYLGQTFPAAPLTASFRDVI
CYERQQQSGRAYGDARQYWFSRLPTLPACPQLPTCVQLPTGSPSPAMQTNASEIPRFVRY
RHQLAPSCWRRLQQGCQQQGVSPSAFLLTVFSEVIGRWSENRHFTLNLTVMNRPNIHKDI
DKLVGDFTSVSLLEVDLRSPKTVYERVKQIQKQLWQDLEHRTFSGIEVMREWGRQQGVGH
ARMPIVFTSALVGEGKNQVQEAISETQLDLVFDYGISQTPQVWIDCQIMVLQGRLQLNWD
VMADVFPKGVVAAMFSTFIDSVERIDSVECIDSIECIDRVKCLCMEEVGTGEALCDSPLF
WHSALSLPLPESQQQRRKQVNATEKTLTPRCLHDGILARAAQQPQAIALVDPQHCLTYAA
LITRAQALAAKLNSHQRYAVLMEKRHEQVVAVLGIFIAGSAYVPVDIHQPPARILTILSD
AAVSGVVTASPQACLADAHFREINLSLLAQIPDAIEAKILPLPHDLAYVIYTSGSTGQPK
GVMISHDAAYNTLADMQQRMALTPDDRVLALARLSFDLSVFDIFGVLGAGGALIFPDEGD
LQNPARWAHDIAQHQITLWNSVPAQMKMLTDYLRAEQITLPSLRYILLSGDWIPVNLPPA
IAQIAPHCTQLALGGATEAAIWSNYWRIDPQITYPVSIPYGVPLTNQQFRVVNPWGEDCP
DWGAGELLIGGRGVAQGYWQDEAKTQAHFFIDTQGLRWYRTGDLGRYTSEGVIEFLGRRD
HQIKVRGYRVETGEIEAQLLKLPEVAQAVVMQTTQAIQTEQAEQATQIAQATQATQATQA
TQAAQAAQTAQTTQTTQTTQTAQATQIAQTTQATPTTPTTQATPTTHTELQAYIEAAQVA
AASDYTQSLREQGRTALAHLQSAAQQAGDALDRPCIDRLFSLLDKVALMQMVKALSDMQT
VNTHHAVTLDAIMEKGQIASVNRQLLRRWLRALTQHQYLQQINDTYRLISVVAEQEIRLC
WQQCEQLITQLDDNRGLLTYLERSSQCLPELLQGKEDPLNLLFPDGRLDVATQAYQNNLI
SQFMNRLLLKAAEQKVKNQAQGRVLKVFEIGAGVGGTSNVLIPLFAEGNAEYTFTDISPF
FLNEARKRYQHYDFIHYQLFDFNQSPVQQGLDCGQYDLVVAANVLHNAIIARHGLNNLRQ
LLAPGGWLLIIEATRDNYQLMTSMEFKQGLTAFEDERLALDSPFLPQQNWIHALQDVGAE
MLWAYPPTDDVLHKMGQSFIFAQFNSQRMSCEPDALLAYLQQQLPDYMVPAKLVILDKLP
VSANGKIDRKQLPRLPESQQRQAPALQDTDSPLEKTLLALGRTLIGNNAMGVDDDFFTSG
GDSLLITQWINQVREVLGEDKVPWEGCLRQVLQQPTARALAAYLRNIREEEPESQRPQMA
VTCLKESACLKERSGLKERSEEPVVILHEGSGTVLPYLSLVDKLSGPIYGVNVTDSAAFL
SIPAERLICQLASTYLPEIQKVGDQCHLVGYCMGGLLAFEIARQALENGRPVSSLTIISS
YQIPYHINDPLMIDLVMSWTLGVEPPWNLLKADLEGIYHAILADKPAVITVNAVVERAKA
NGLTALANEYACLQQQSNEVRLSQLLTAIEQHSTASSHVSRQPFDVFRHSIQGVCQYQPN
YFAGDMTFVCQQGDTYLLPALQQDMTAFWQTYCLGQINRLTLPGDHFTCLSADNISPLIQ
HLEQCKGVRG
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaatctagattcatcttcagcaacacaggccaccgatctactcgtgaacctt
gaacaacaggaggttcgtttctggttagagggtgaaaggatcaaatttcgtgcgccagaa
ggggtcatgacgggggcggtgatggcgtccttaaaagcgctgaaaccccagttggtggca
attttagccgtgagggagcagcaagaaaccctgcctatcgatacagaaaaccgttttgtg
gcttttccgcttagccatgtacaggctgcttattttgttgggcggcagagcgtgtttgaa
tatggcggggttgggtgtcatggctattttgagatcctcgcaccttgttgggataaggct
aagctggaatgcatctgggaacagatgattattcgccatgatatgttgcgagccattatc
acgccaaatggtgagcagcgtatcctgccttctgtcgcgcctttcgtgattgagcaggtt
gatgtttcatcagaaaccgtgcgtcaggctatgtctcatcgggtttatcaaaccgataaa
tggccattgtttgatctcaaaatcagtcatcagaacggtaaagattgtttgcatttcagt
attgatttgctgattgctgatttccttagcgtgcagattttgctggcggaattattcaag
ggttatctcgggcaaactttccccgccgcgccactgactgcgagtttccgcgatgtgatt
tgctatgaacgccagcaacagagtgggcgtgcctatggtgatgcgcgccaatattggttt
tctcgactccctacgttaccggcatgtccacaattaccgacatgtgtacagttaccgaca
ggttcgccatcaccggccatgcaaacaaacgcgtcagaaataccgcgatttgtccgttat
cgccatcaactcgctccttcatgttggcggcgcttgcagcaaggttgccagcaacaaggt
gtttcaccgtcagcgtttttactcactgtttttagtgaagtgattggccgatggtcggag
aaccgccattttaccttgaatctcacggtaatgaatcgtcccaatattcataaagatatc
gacaaattggtgggtgattttacctcagtcagcttattggaagtcgatttacgctcaccc
aagacggtgtatgagcgagttaaacagatccagaagcagctttggcaagatctggaacac
cgaacattttctggcattgaagttatgcgtgaatgggggcggcaacaaggcgtggggcac
gccagaatgcccatcgttttcaccagtgctttagtcggagagggcaaaaatcaggtacaa
gaagcgatcagcgagactcaactggatctggttttcgactatggtattagccaaacgccg
caggtctggattgattgtcaaatcatggtgttacaagggaggttacagctaaattgggat
gtgatggccgatgttttccccaagggcgtcgtcgccgccatgttttctacgtttattgac
agtgttgagcgtattgacagtgttgagtgtattgacagtattgagtgtattgatcgtgtt
aagtgcctctgtatggaggaggtcggcacgggagaggcactttgtgactcgcccttgttt
tggcattcagcattatcgttgcccttgcccgagagccaacagcaacggcgcaagcaggtc
aatgctacggaaaaaacactgacaccccgttgccttcatgatgggatattagcccgcgca
gcacagcaaccacaggccattgcgctagtggatccacaacactgccttacttacgcggcc
ttaatcacccgtgcgcaggcgttggccgctaaacttaatagtcaccaacgctatgcggta
ttgatggaaaaacgccatgagcaagtggtggccgtgttggggattttcatcgcgggaagt
gcctatgtgccggtggacatccaccaaccgcccgcaaggattttaacaatactgtccgat
gcggcggtcagtggggtggtgacggcatcgccacaagcctgtttggctgatgcccatttt
agggagatcaatctgtcgctattagcacagatacccgatgccattgaagcaaaaatactg
cccttgcctcatgatctggcttatgtcatttacacctctgggagtacaggccaaccgaaa
ggcgtgatgatcagccatgatgcggcctataacacccttgccgatatgcaacagaggatg
gccctcacccctgatgatcgcgtgctggcattggcgcgcttaagttttgatctatccgtt
tttgatatttttggtgtgttgggcgcgggaggggcattgattttccctgacgagggcgat
ctacagaatccggctcgttgggcgcatgacattgcccagcaccagataaccctgtggaac
tcggttcctgcacaaatgaagatgttaacggactatctgcgggccgagcagataacgctg
ccatcactgcgttatatcttgctttccggggattggatccccgttaacttacctccagcg
atcgcccagattgcgccacattgtactcaattggcattgggcggtgcgaccgaagcggcg
atttggtcgaactactggcggatagatccgcaaataacctaccccgtcagtattccttat
ggtgttccgctaaccaatcaacaatttagggtagtaaacccttggggagaggattgcccg
gattggggggcgggggagctgttgattgggggccgaggggttgctcaaggctattggcag
gatgaggctaaaacacaagcgcatttcttcattgatacgcaaggtttgcgttggtatcga
accggagatttagggcgttatacctcagaaggtgtcattgaatttttagggcgtcgtgac
caccaaatcaaagtgcgtggctaccgtgttgagacgggcgaaattgaagcacagttattg
aaattacctgaggtggcgcaggctgtcgtcatgcagaccacacaagctatacaaaccgaa
caagccgaacaagccacacaaatcgcacaagccacacaagccacacaagccacacaagcc
acacaagccgcacaagccgcacaaaccgcacaaaccacacaaaccacacaaaccacacaa
accgcacaagctacacaaatcgcacaaaccacacaagccacaccaaccacaccaaccaca
caagccacaccaaccacacatacagaattgcaggcttatatcgaggcggcacaggttgct
gctgcttcagactatacccagtcacttcgggaacaggggcgcactgcactggcacatctt
cagtctgctgctcaacaagcgggggatgcactggataggccgtgtatcgacagattattc
agcttactggataaagtggcattaatgcagatggttaaagccttatcagatatgcaaaca
gtgaatacacatcatgctgtgacactggatgccattatggaaaaaggccaaatcgcatcg
gtaaatcgtcaattactacgccgttggttgcgggcgctgacacagcaccaatatcttcaa
caaattaatgatacttatcgcttaatcagtgtggtcgcggagcaggagattaggctttgc
tggcagcaatgtgagcaactcattacacagcttgatgataatagggggttgctcacttat
ctggagcgtagcagccaatgtttacctgaactcttacagggcaaagaagatcccctcaat
cttctttttcctgatggtcgccttgacgtcgcgacacaggcttatcaaaacaacctcatt
agccagtttatgaaccgcctgttgctcaaggcggcggagcagaaggtaaagaatcaggct
caagggcgggtcttaaaggtgttcgaaatcggggccggcgtggggggaaccagtaatgtg
ttgatccctctattcgccgaggggaacgcggaatataccttcactgatatctcgcctttt
ttcttaaatgaagcgcgaaaacgttatcaacattatgactttatccattatcaactgttt
gactttaaccagtcgccagtacagcaagggcttgattgcggacagtatgatttagtggtc
gctgccaatgttttgcataacgcgattattgcccgtcacgggttgaataacttacgtcaa
ctgttagcacccggtggttggttgttaatcattgaagccacgcgggacaattatcagctg
atgacgtccatggaatttaaacagggattaacggcgtttgaagatgagcgtcttgcattg
gactctccctttttgccacaacaaaactggatacatgcactacaggatgtaggagccgaa
atgctatgggcctatccacccacggatgatgttttacataaaatggggcaaagttttata
tttgcgcaatttaatagccagcgtatgtcttgcgaacctgatgccttgctggcgtatttg
cagcaacaattaccggactatatggtgccagctaaactggtcatattggataaattgccg
gtttctgccaatggaaaaatagatcgcaaacagctaccacggttacctgagagccaacaa
aggcaagccccagcgctgcaggatacggattcaccactggagaagacgttgcttgctctt
ggtcgtaccctcatagggaataatgccatgggtgtcgatgatgattttttcaccagtggc
ggcgattcattgctgattactcagtggattaaccaagtgcgagaagtcttgggtgaagat
aaggtgccatgggaggggtgcctacggcaggttttacagcaacctaccgcgcgggcattg
gcggcttatctccgcaatatccgggaggaagagcccgagagtcagcgcccccaaatggcg
gtgacgtgcctgaaagaaagtgcgtgtttgaaagaaagatcgggtttgaaagaaagatca
gaggaaccggtggtcatcctccacgaagggagcggtaccgtattaccgtatttatcctta
gtcgataaattatctggccctatttatggggtcaatgttaccgacagcgccgcttttctc
tcgattcctgcagaaagattaatttgccagttagccagtacctatctacctgaaattcag
aaggtgggtgatcagtgccatttagtgggatattgcatgggggggctactggcttttgaa
attgcccggcaggcattggaaaatggaaggccggtgagttcgttgaccattatcagtagc
tatcaaattccatatcacatcaacgatcctttgatgattgatttggtgatgagttggacg
ttaggtgtcgaacctccctggaatttgctgaaggctgatttagaaggtatttatcacgcc
attttggccgacaaaccggcggtgattaccgtgaatgccgtcgttgaacgtgcaaaagcg
aatgggttaaccgctctggcaaatgagtacgcctgtcttcaacaacaatctaatgaggtg
cgtttatcacaattgctaacggcaattgaacagcactcaacagcatcgtcccacgtttct
cgccagccgtttgatgtgttccgccacagtatccaaggcgtgtgccaataccagccaaac
tactttgccggggatatgacttttgtttgccaacagggggatacctaccttctgcctgct
ttacaacaagatatgacggcattttggcaaacttactgtcttgggcagataaaccgcctc
accttgccaggcgatcactttacgtgcctgtcggcggataatatctcgccactcattcag
catcttgaacaatgcaaaggagtgcggggatga
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