KEGG   Yersinia pestis Harbin 35 (biovar Medievalis): YPC_2412
Entry
YPC_2412          CDS       T01874                                 
Symbol
putA
Name
(GenBank) 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
yph  Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph00250  Alanine, aspartate and glutamate metabolism
yph00330  Arginine and proline metabolism
yph01100  Metabolic pathways
yph01110  Biosynthesis of secondary metabolites
Module
yph_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:yph00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    YPC_2412 (putA)
   00330 Arginine and proline metabolism
    YPC_2412 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:yph03000]
    YPC_2412 (putA)
Enzymes [BR:yph01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     YPC_2412 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     YPC_2412 (putA)
Transcription factors [BR:yph03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    YPC_2412 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH RHH_1
Other DBs
NCBI-ProteinID: ADV98978
LinkDB
Position
2338374..2342345
AA seq 1323 aa
MASTTMGVKLDEATRDRIKSAAQRIDRTPHWLIKQAIFNYLEKLESNSELPELATTSSLS
LQDTEDAIPQLTENTHQPFLDFAEHVLPQSVTRAAITAAYRRPETEAIPMLLEQARLPAD
LAQATHKLAYSIAEKLRNQKSAHGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKP
TRDALIRDKISNGNWHSHLGRSPSMFVNAATWGLLFTGRLVSTHNEAKPSGSLNRIIGKG
GEPLIRKGVDMAMRLMGEQFVTGETISEALANARKLEDKGFRYSYDMLGEAALTEADAQA
YLLSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYERVMDELYPRLLSLTLQ
ARQYDIGINIDAEEADRLEISLDLLERLCFEPQLAGWNGIGFVIQAYQKRCPSTIDAVID
MAQRSRRRLMIRLVKGAYWDSEIKRAQIDGLEGYPVYTRKVYTDVSYLACARKLLAVPNL
IYPQFATHNAHTLSAIYHLAGQNYYPGQYEFQCLHGMGEPLYEQVVGKVAEGKLNRPCRI
YAPVGTHETLLAYLVRRLLENGANTSFVNRIADATLPLDELVADPVSAVEAMAAAEGQLG
LPHPRIPLPRELFGKDRANSSGVDLANEHRLASLSSALLASASQVWRAEPVIDAEQDNGD
ALPVINPAEPADVVGYVREATEGEVSRALDAAARAGAIWFATPPAERAAILIRAAELMEN
QMQTLMGILVREAGKTFSNAIAEVREAVDFLHYYAGIVRDNFANDSHRPLGPVVCISPWN
FPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLDAGIPQGVLQLLPGRGDSVG
ALLVNDARVRAVMFTGSTEVATILQRSIAGRLDPQGRPTPLIAETGGLNAMIVDSSALTE
QVVTDVVASAFDSAGQRCSALRILCIQDDVAEHTLQMLRGAMAECRMGNPERLSTDIGPV
IDAEAKTGIERHIQAMRAKGRKVYQAARTNSLDEKEWQRGTFIKPTLIELDSFDELQKEV
FGPVLHVVRFQRQHLNELVDQINASGYGLTLGIHTRIDETIARVTEKAKVGNLYVNRNMV
GAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLSSRPDDALANTLAHQDGEQQQNVAGREAL
LTAHRAFTQWATEQQHDSLATLCQRYASLAQGGTVRLLPGPTGERNTYALLPRERVLCLA
DTESDTLTQLAAVLATGSQVLWPENDVQKALLPQLPTEVQSRITLTHDWQTANITFDAVI
YHGDADQLRTLCEQVAQIDGPIVSVQGFARGETNILLERLLIEHSLSVNTAAAGGNASLM
TIG
NT seq 3972 nt   +upstreamnt  +downstreamnt
atggcgagtaccacaatgggcgtaaagcttgatgaagcaacacgagaccgcatcaagagt
gcagcacaacgtattgaccgcacaccacactggctcattaaacaggctattttcaactac
ttagaaaaactggaaagtaacagtgaattgccagaactggcaacaacaagttcactctct
ctgcaagacacagaagatgctataccgcaactcactgaaaacactcatcagccattcttg
gattttgcggaacacgtgctcccgcagtcggttacccgtgccgccattactgcggcttat
cgtcgcccagaaaccgaagcgatccccatgttattggaacaagcacgcctacccgcagat
ttagcgcaagcaacacataaactggcctattccattgctgaaaaactgcgtaatcaaaaa
agtgcccatggccgcgcgggcatggtacagggattgctgcaagagttctcactctcttca
caggaaggcgtggcattgatgtgtctggctgaagccctactacgtattcctgacaagcca
acccgcgatgcactgatccgcgataaaattagcaacggcaactggcattcgcatctggga
cgtagcccgtcaatgtttgtcaatgcagccacttggggcctgctatttactggccgccta
gtctctacccataacgaagccaaaccctccggctcactgaaccgaattatcggtaaaggg
ggtgagccgttgattcgtaaaggcgtcgatatggcgatgcgcttgatgggcgagcaattc
gtcaccggtgaaaccatttcggaagcattggcaaatgcccgtaaattagaagataaaggg
ttccgctactcttacgatatgctgggcgaagcggcattaactgaagcagatgcacaggct
tacctactctcttaccaacaggcaattcatgccattggtaaagcctcaaatggccgtggt
atttacgaaggcccggggatttcaatcaaactttccgccctacacccccgttatagccgt
gcgcaatatgagcgagtgatggacgagttatacccgcgtctgttatcgctaacattacag
gcccgtcagtatgatatcggtatcaatattgatgccgaggaggctgatcgtctggaaatc
tctctcgacctgttggagaggctgtgcttcgaaccccaattggcaggttggaatggcatt
ggttttgttattcaggcataccaaaagcgttgtccgtccactattgatgccgtgattgat
atggcacaacgtagccgccgccgtctgatgattcgcctcgtcaaaggggcgtattgggac
agcgaaattaaacgtgctcaaattgacgggttggaaggatacccggtttatactcgtaag
gtttataccgatgtgtcctatctggcctgcgcccgcaaattattggctgttccaaacctg
atctatccgcaatttgcgacgcataatgcgcatactctgtcagcgatttaccaccttgcc
gggcaaaattactaccccggccagtatgagttccaatgcctacacggcatgggggagcca
ctgtatgagcaagtggtcgggaaagttgccgagggtaagctcaaccgcccatgccgtatt
tatgctccggtcggtacccatgaaacattgctggcttaccttgtgcgccgtctgttggaa
aacggtgccaacacctcgtttgtcaatcgtatcgctgatgccacattaccccttgatgaa
ctggttgcggacccggtcagtgcggtagaagccatggcggcggctgaaggtcaacttggt
ttacctcatccgcgtatccccttaccacgtgagctgtttggtaaagatcgcgccaactcc
agcggggtggatcttgccaacgaacaccgccttgcgtcgctctccagcgcgttgctggcc
agtgccagccaggtatggcgtgcggagcccgtcattgatgcagagcaggacaacggtgac
gcgctaccggttatcaacccggcagaacctgccgatgtggttggctatgtccgcgaggca
accgaaggtgaagttagccgtgcattggatgctgccgcccgtgctggcgctatctggttt
gccacccccccggctgaacgggctgctatcttaatccgcgccgctgagttgatggaaaat
cagatgcaaacgctgatgggaatattggtgcgtgaggcgggtaaaaccttcagtaatgcc
atcgccgaagtccgtgaagccgtggacttcttgcattattacgccggtatagtcagggat
aacttcgccaatgatagccatcgcccgctcggcccggttgtttgtatcagtccgtggaac
ttcccactggctatctttaccggtcaggttgccgccgcgttagcagcaggcaacagtgtt
ttggcaaaaccagcggaacaaacaccactcattgccgcacaggccgtgcgtattctgctg
gacgcaggcatcccacagggtgttctgcaattgctacctggccgcggtgacagtgttggc
gcgctactggttaatgatgcccgtgtgcgtgcagtgatgtttaccggttctaccgaagta
gccactattttacaacgtagtatcgcaggccgtcttgatccacaggggcgtccaacaccg
ctgatcgcggaaaccggtggcctgaatgcgatgattgttgactcttcggcactgactgaa
caagttgtgaccgatgttgtcgcctctgcctttgacagtgcaggccagcgttgttctgcc
ctgcgtattctctgcattcaggatgatgtcgctgaacatacgctgcaaatgttgcgtggt
gccatggcggaatgccggatgggcaatccagaacgcctgtctacggatattggtcccgtt
atcgacgccgaagcgaaaactggcattgagcgccatatccaagcgatgcgagccaaaggg
cgtaaagtttatcaggcagcccgtaccaacagcttggatgagaaagagtggcaacgtgga
acatttatcaaaccgaccttgattgaattggacagttttgatgagctgcaaaaagaagtt
tttggcccagtgctacatgttgtacgcttccagcgtcagcatcttaatgagttagtcgat
caaattaatgcatctggctatggcttaaccttgggcatccacacccgtattgatgaaacc
atcgcccgtgtcactgaaaaagcaaaagtaggcaacctctacgttaaccgtaatatggtc
ggtgccgttgtcggtgtacaaccttttggtggcgaggggttatcaggtaccggtcccaaa
gctggcggcccattgtatttgtatcgcctgctgagtagccgcccagacgacgcactggcc
aataccctggcgcatcaggatggcgaacagcaacaaaatgttgcaggccgtgaagcgctg
ctgaccgctcaccgcgcgttcactcaatgggccacggaacaacaacatgattcgctggcc
actctctgccaacgctatgcctctctggcacaaggtggaaccgtgcggttattgccaggc
ccgaccggtgagcgcaatacctatgccctgctgcctcgtgagcgagtcctttgtcttgcc
gataccgaaagcgatactcttacgcagttggctgcggtgttggcgaccgggagccaggtt
ctatggccggagaatgacgtacagaaagcactgttgcctcaattgcctactgaagtgcaa
tcgcggatcacccttacccacgattggcaaaccgctaacatcaccttcgatgccgttatc
tatcacggcgatgcggatcaactacgcacgctatgtgagcaggttgcgcaaattgatggc
cccattgtctctgtacaaggcttcgctcgtggtgaaaccaatatcctgctggaacgctta
ttaattgagcattcattgagtgtcaatacagctgccgctggtggcaacgccagtctgatg
actatcggctag

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