Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_0070
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Entry
YpsIP31758_0070 CDS
T00570
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Pathway
ypi00540
Lipopolysaccharide biosynthesis
ypi01100
Metabolic pathways
ypi01250
Biosynthesis of nucleotide sugars
Module
ypi_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
YpsIP31758_0070 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ypi01005
]
YpsIP31758_0070 (rfaD)
Enzymes [BR:
ypi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
YpsIP31758_0070 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ypi01005
]
Core region
YpsIP31758_0070 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
adh_short
Motif
Other DBs
NCBI-ProteinID:
ABS49685
UniProt:
A7FCU3
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All DBs
Position
complement(75475..76407)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNNIGYKDILVVDNLKDGTKFVNLVDLDIADYMDKEDFVASI
VAGDDMGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKDILHFCLDRSIPFLYASSAATY
GGRTDNFIEDRQYEQPLNVYGYSKFLFDQYVREILPQADSQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINAGERPKLFAGSENFKRDFIYVGDVADVNLWFWQNGVSGIFNCGTGRA
ESFQAVADAVVDYHQSGPVEYIEFPEKLKGRYQAYTQADLTKLRAAGYGKPFKTVAEGVK
EYLAWLNRSV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttacaggcggcgcaggtttcattggcagcaatatagttaaggctctgaat
aatattggctacaaagatattctggtggttgataacctcaaagacggcactaaattcgtc
aatctggttgatctggatatcgctgattacatggataaagaagattttgtcgccagtatt
gttgcgggtgatgacatgggcgatatcgatgctattttccacgaaggcgcgtgttcttcc
accaccgagtgggatggcaagtacatgatggataacaactatcagtattctaaagatatc
cttcacttctgtctggaccgtagtattcctttcttatacgcctcttctgccgccacttac
ggtgggcgcactgacaactttattgaagatcgtcagtacgaacagccacttaacgtttat
ggctattccaaattcttgtttgatcagtatgtgcgtgaaattctgccacaagccgattcg
caaatttgtggattccgttatttcaacgtttatggtccacgtgaaggccataagggcagc
atggccagcgtcgctttccatctgaataaccaaattaatgcaggtgaaaggcctaagtta
ttcgcgggtagcgaaaactttaaacgtgatttcatttatgtgggtgatgttgctgacgtt
aatctgtggttctggcaaaacggcgtatccggtattttcaactgcggtactggccgggca
gagtctttccaggctgtcgctgatgcagtggtggattatcaccaaagtgggccagtcgaa
tacatcgagttccctgaaaaactgaaaggccgctatcaggcatatacacaagccgatctc
actaaattacgggctgccggttatggtaaaccgtttaaaacggtcgctgaaggcgttaaa
gaatatctggcctggctcaatcgctcagtctaa
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