Yersinia pestis KIM10+ (biovar Mediaevalis): y0083
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Entry
y0083 CDS
T00092
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk00540
Lipopolysaccharide biosynthesis
ypk01100
Metabolic pathways
ypk01250
Biosynthesis of nucleotide sugars
Module
ypk_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
y0083 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ypk01005
]
y0083 (rfaD)
Enzymes [BR:
ypk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
y0083 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ypk01005
]
Core region
y0083 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AAM83676
UniProt:
Q8ZJN4
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All DBs
Position
91394..92371
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AA seq
325 aa
AA seq
DB search
MGCGTQPRKLARVNTMIIVTGGAGFIGSNIVKALNNIGYKDILVVDNLKDGTKFVNLVDL
DIADYMDKEDFVASIVAGDDMGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKDILHFCL
DRSIPFLYASSAATYGGRTDNFIEDRQYEQPLNVYGYSKFLFDQYVREILPQADSQICGF
RYFNVYGPREGHKGSMASVAFHLNNQINAGERPKLFAGSENFKRDFIYVGDVADVNLWFW
QNGVSGIFNCGTGRAESFQAVADAVVDYHQSGPVEYIEFPEKLKGRYQAYTQADLTKLRA
AGYGKPFKTVAEGVKEYLAWLNRSV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtggggtgtggtacccaaccaagaaaattagcaagggtgaatacgatgattatcgttaca
ggcggcgcaggtttcattggcagcaatatagttaaggctctgaataatattggctacaaa
gatattctggtggttgataacctcaaagacggcactaaattcgtcaatctggttgatctg
gatatcgctgattacatggataaagaagattttgtcgccagtattgttgcgggtgatgac
atgggcgatatcgatgctattttccacgaaggcgcgtgttcttccaccaccgagtgggat
ggcaagtacatgatggataacaactatcagtattctaaagatatccttcacttctgtctg
gatcgtagtattcctttcttatacgcctcttctgccgccacttacggtgggcgcactgac
aactttattgaagatcgtcagtacgaacagccacttaacgtttatggctattccaaattc
ttgtttgatcagtatgtgcgtgaaattctgccacaagccgattcgcaaatttgtggattc
cgttatttcaacgtttatggtccacgtgaaggccataagggcagcatggccagcgtcgct
ttccatctgaataaccaaattaatgcaggtgaaaggcctaagttattcgcgggtagcgaa
aactttaaacgtgatttcatttatgtgggtgatgttgctgacgttaatctgtggttctgg
caaaacggcgtatccggtattttcaactgcggtactggccgggcagagtctttccaggct
gtcgctgatgcagtggtggattatcaccaaagtgggccagtcgaatacatcgagttccct
gaaaaactgaaaggccgctatcaggcatatacacaagccgatctcactaaattacgggct
gccggttatggtaaaccgtttaaaacggtcgctgaaggcgttaaagaatatctggcctgg
ctcaatcgctcagtctaa
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