Yersinia pestis El Dorado: CH46_3839
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Entry
CH46_3839 CDS
T03719
Symbol
gabD
Name
(GenBank) aldehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ypl
Yersinia pestis El Dorado
Pathway
ypl00250
Alanine, aspartate and glutamate metabolism
ypl00310
Lysine degradation
ypl00350
Tyrosine metabolism
ypl00650
Butanoate metabolism
ypl00760
Nicotinate and nicotinamide metabolism
ypl01100
Metabolic pathways
ypl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ypl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CH46_3839 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CH46_3839 (gabD)
00310 Lysine degradation
CH46_3839 (gabD)
00350 Tyrosine metabolism
CH46_3839 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CH46_3839 (gabD)
Enzymes [BR:
ypl01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CH46_3839 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CH46_3839 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CH46_3839 (gabD)
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Motif
Pfam:
Aldedh
DUF2114
Motif
Other DBs
NCBI-ProteinID:
AJJ13272
UniProt:
A0A3G5L2A3
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Position
complement(4219809..4221305)
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AA seq
498 aa
AA seq
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MSEYHEKNNALFKSITALDGALFINGEFRKGAGGRLPVENPATGKVIGHLAAATPEEIEE
AVAAARRAFPAWAAERPKARANALHRLGDLIAGDALNMARNMTIEQGKPVNEAQGEILKL
AEICHFYGEEATRVQGDVVPNDPPGFQSLVVREPVGVVGAITPWNYPAELVGWKLCASLA
AGCTLIIKPAELTPYTALAIAEKCLEAGIPAGVVNVLTGKGEQVGQALVEHPQVDKIAFT
GSSAVGLHIQQSCPQVKRLSLELGGNGPMVVTACADVAAAVKGAVRRSFRNCGQVCIAIN
RIYVHRSCYRAFVSKMGVATNGLRLGNGLDDPAADLGAMASVEPLNKTRAHLEDALAKGA
RLVAGGKAPEGVEYAKGHFFRPTVLADCTHQMRVMTEETFGPLVGLAPFDDIDEVISRAN
DTPYGLAAYVYARDLAAIHRLSAALDYGNVAINNVDASMMNAPYGGRKQSGVGYEHGREG
LLEYFNFKHIRLYHGIGD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtatcatgaaaaaaataatgcactcttcaagtcgattaccgcgttagacggc
gctttatttatcaatggtgagttccgcaaaggcgcgggggggcgtctgccagtggaaaac
ccggctaccggcaaagtgatcggtcatctcgcggcggctactccagaggagatcgaagag
gcggttgctgcggcgcgtcgcgcttttcctgcctgggccgccgaacggccaaaggcccga
gcgaatgcgttgcaccgtttgggtgatttgatcgccggcgatgccctgaatatggcgcgg
aacatgaccatcgaacagggcaagccggttaacgaagcgcaaggtgaaatactgaagctc
gccgaaatttgtcatttttatggcgaagaagcgactcgcgtgcaaggtgacgttgtgccg
aatgaccctccgggttttcaaagtcttgtcgtgcgagaaccggttggggtggtgggggcg
attaccccttggaattacccggccgaactggtgggatggaagctgtgcgccagccttgcc
gcaggctgtaccctcattatcaaacctgctgaactgacaccctacacggcgctggccatc
gctgaaaaatgccttgaagcgggtattcctgccggtgtcgtcaatgtgttgacggggaag
ggggaacaggttgggcaggcgctggttgaacatccacaggtcgataaaatagcctttact
ggttccagcgcggtcggtttgcatatccagcaaagttgcccgcaggttaagcggttgtcg
ctcgaactcggcggcaatggtccgatggtggtgaccgcctgcgcagatgtggctgccgca
gttaagggcgcggtgcgtcgtagcttccgcaactgtgggcaggtctgcattgcgatcaat
cgtatttatgtccaccgctcatgctatcgggcgtttgtgagcaaaatgggggtggccacc
aatgggttgcgccttggcaatgggttggacgatccagcggcggacttgggtgcgatggcc
tctgtagagccactgaacaaaacgcgtgcgcaccttgaggatgctctggcaaagggggcg
cgcttggttgcgggggggaaagcaccagagggggtggaatatgccaagggccatttcttc
cgtccgactgtgctggccgactgcacacaccaaatgcgcgtcatgaccgaagagacgttt
ggcccgctggtcggcttagcccctttcgatgatatcgatgaagtgattagtcgagcgaat
gatactccctatgggctggcagcttacgtttatgcacgagatctggcggctatccaccgg
ctgtcagcggcgttggactacggcaatgtggcaatcaataacgtcgatgccagcatgatg
aatgcgccctatggggggcgtaagcaaagtggtgtgggctacgagcatggccgtgagggg
ttgctggagtatttcaatttcaagcacatccgcttgtaccacggtatcggggactaa
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