Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_3389
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Entry
YPDSF_3389 CDS
T00505
Name
(GenBank) 3-octaprenyl-4hydroxybenzoate decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp00130
Ubiquinone and other terpenoid-quinone biosynthesis
ypp01100
Metabolic pathways
ypp01110
Biosynthesis of secondary metabolites
ypp01240
Biosynthesis of cofactors
Module
ypp_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
YPDSF_3389
Enzymes [BR:
ypp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
YPDSF_3389
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
ABP41742
LinkDB
All DBs
Position
complement(3891063..3892583)
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AA seq
506 aa
AA seq
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MAHPIAAEMISMKYRDLRDFLSLLEQRGELKRISQPIDPYLEMTEIADRTLRAGGPALLF
ENPKGYSMPVLCNLFGTAKRVAMGMGQEDVSALRDVGKLLAFLKEPDPPKGFRDLFDKLP
KFKQVLNMPTKRLNSAPCQEQVWQGEDVDLSRIPVMHCWPEDAAPLVSWGLTITRGPHKE
RQNLGIYRQQVLGKNKLIMRWLSHRGGALDYQEWCEAHPCERFPVAVALGADPATILAAV
TPVPDTLSEYAFAGLLRGHKTEVVKCLSNDLEVPASAEIVLEGYIEQGDMAPEGPYGDHT
GYYNEIDNFPVFTVTHITQRQDAIYHSTYTGRPPDEPAVMGVALNEVFVPILQKQFPEIV
DFYLPPEGCSYRLAVVTIKKQYAGHAKRVMMGIWSFLRQFMYTKFVIVCDDDINARDWND
VIWAITTRMDPSRDTVLIENTPIDYLDFASPVSGLGSKMGLDATNKWPAETPREWGRPIK
MDEDVRARIDALWDELAIFSDKDAKR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatcccatagccgccgaaatgatcagcatgaaataccgtgacttacgtgacttc
ctctcattactggaacagaggggggaacttaaacgcattagccagcccattgatccttat
ttggaaatgacagaaattgccgatcgcacgttacgtgctggtgggcctgcgttacttttt
gagaaccctaaaggttacagcatgcccgtgttgtgtaatctgtttggcaccgctaagcga
gtcgccatggggatggggcaagaagatgtcagcgccctgcgagatgttggtaaattattg
gccttcctgaaagaacccgatcccccaaaaggtttccgtgacttatttgataagctgcca
aaatttaagcaggtattgaatatgccaacgaaacgcttgaactcggccccgtgtcaggag
caagtttggcaaggtgaggatgttgatttaagtcgcatccctgtgatgcactgctggcca
gaagatgccgcaccactagtctcttgggggttgactattacacgtggtccccacaaagaa
cggcagaatctaggcatctatcgccagcaggtattgggtaaaaacaaattaattatgcgt
tggctatcgcatcgtggtggtgcgctggattatcaggagtggtgtgaggcacacccttgt
gaacgttttccggtcgctgtcgccttgggagcagaccctgctacgatcttagccgcagtg
accccggtaccagacacgctgtctgaatatgcctttgccggcttgttacgcggccataaa
acggaagtggtgaagtgtctttccaatgaccttgaagttcctgcaagtgcagaaattgta
ttggaaggatatatcgaacaaggtgatatggctccggaaggtccttatggtgatcatacg
ggctattacaatgaaatagataatttccccgtgtttaccgtcacgcatattacacagcgc
caagacgcaatttatcattcaacctatacgggccgaccaccggatgaacctgcggtaatg
ggggtggcactgaacgaagtctttgtacctattttgcaaaagcaattcccggaaattgtt
gatttctacttgccaccagaagggtgctcataccggttggcggtggtaaccatcaagaaa
caatatgcaggccatgccaaacgcgtgatgatgggaatatggtcgtttttacgccagttt
atgtataccaagtttgttattgtttgtgatgacgatattaatgctcgtgattggaatgat
gtaatttgggcgatcaccacccggatggacccatcccgcgatacggtgttaattgaaaat
acaccgatagattatttggatttcgcctcaccggtttccggtttgggatcgaaaatgggg
ctggatgccaccaacaaatggccagcagagactccgcgtgaatgggggcgtccaattaag
atggacgaagacgtccgtgcccgtattgatgctctgtgggatgagctggccattttcagt
gacaaagacgcgaaacgctaa
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