KEGG   Yersinia pseudotuberculosis ATCC 6904: DJ40_1423
Entry
DJ40_1423         CDS       T03307                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ypq  Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq00740  Riboflavin metabolism
ypq01100  Metabolic pathways
ypq01110  Biosynthesis of secondary metabolites
ypq01240  Biosynthesis of cofactors
ypq02024  Quorum sensing
Module
ypq_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:ypq00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    DJ40_1423 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DJ40_1423 (ribD)
Enzymes [BR:ypq01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     DJ40_1423 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     DJ40_1423 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AIN14317
UniProt: A0A3G5KLW6
LinkDB
Position
complement(1535424..1536533)
AA seq 369 aa
MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMA
GEKARGATAYVTLEPCSHYGRTPPCADALVAAGVIRVVAAMQDPNPEVAGRGLYKLKQAG
IAVDHGLMLAEAEAVNLGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQD
VQRFRAESSAILSTSATVLADDPSLTVRWQDLDAETQVLYPHDSVRQPVKIILDSHNRVT
PRHKVIQQDGPCWLARVDADDQPWPGNIEQLLLPRYGNGVDLVVLMMQLGKRNINSVWVE
AGPQLAGALLQAGVVDELILYIAPKLLGSDARGLCELAGLTNLSQAPEFAFSDVRLVGPD
LRLRLKPKY
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgcagcccgatgagttctatatggcccgagcttttgaactggcgcgtttggggcgcttt
acgacgtcgcctaaccccaatgtaggctgtgtcttggttcgtgatggcgagatcgtcggc
gaaggttaccacttacgtgctggagagccgcatgctgaagtgcatgcgttacgtatggcg
ggtgagaaagcgcgaggagccacggcttatgtcactctcgagccgtgtagccattatggt
cggacgccaccttgtgctgatgcgttggtcgccgcaggtgtgatacgggttgttgctgcc
atgcaggatcctaatccagaagttgccgggcgagggctgtataaattaaaacaggccggt
atcgctgtcgatcatggcttgatgttagctgaggccgaggctgttaaccttggtttcttg
aagcgtatgcggactggtttcccttatgtgcaattgaaaatggcggcatcattggacggg
cgtacagccatggcatcaggtgagagccagtggattacctcaccacaggcacgccaggat
gtgcaacgctttagggccgagagttcagctattctcagtaccagtgccacagtattggca
gatgacccttcgctgacggtacgctggcaggatttagatgccgaaacgcaggttttgtat
cctcatgatagtgttcgacagccagtaaaaattatactcgatagccataaccgcgtgact
ccacggcataaagtgatacagcaagacggcccatgctggctggctcgcgtagatgccgat
gatcagccatggcctggcaatatcgaacaactgttgctaccacgttatggtaatggcgtg
gacttggttgtgttgatgatgcaattggggaaacggaatattaactctgtctgggtagag
gctgggccacaactggcgggtgcattgttacaagccggagtggtggatgagttaatcctt
tatatcgcccccaaactcttgggcagtgatgcgcgtggattatgcgagctagctgggctg
acgaatttatcgcaagcgcctgagtttgcatttagcgatgtacggctggtcggtccggac
ttgcgtttacgcttgaagccaaagtattaa

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