Yersinia pestis A1122: A1122_05840
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Entry
A1122_05840 CDS
T01831
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ypt
Yersinia pestis A1122
Brite
KEGG Orthology (KO) [BR:
ypt00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
A1122_05840
Enzymes [BR:
ypt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
A1122_05840
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
AEL71834
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All DBs
Position
1251868..1253850
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AA seq
660 aa
AA seq
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MAAVAVVALVTICIFIILQLFHFVQQRKDDYANQLESIAYSVRQPLSEAILSVDIPQAKK
ILNSLLPIGILSRAEVILPNQIQVLHANFPTERPIPHWAKRVFSLPVQITVPLYALERVP
ANPQPLAHLVLRADSFRMYQFILSALSAMLSTYLLLALVLSVSIAWCINRLIIHPLRAMA
KELEDIGDHGVLHHQLTLPAHHQDDELGVLVRNYNRNQQLLADAYADMGRISHRFPVTEL
PNRSLFISLLEKEIASSTRTDHFHLLVIGIETLQEVSGAMSEAQHQQLLLTIVQRIEQCI
DDSDLLAQLSKTEFAVLARGTRRSFPAMQLARRIMSQVTQPLFFDEITLRPSASIGITRY
QAQQDTAESMMRNASTAMMAAHHEGRNQIMVFEPHLIEKTHKRLTQENDLLQAIENHDFT
LFLQPQWDMKRQQVIGAEALLRWCQPDGSYVLPSGFVHFAEEEGMMVPLGNWVLEEACRI
LADWKARGVSLPLSVNISGLQVQNKQFLPHLKTLISHYHIDPQQLLLEITETAQIQDLDE
ALRLLRELQGLGLLIALDDFGIGYSSLRYLNHLKSLPIHMIKLDKSFVKNLPEDDAIARI
ISCVSDVLKVRVMAEGVETEEQRQWLLEHGIQCGQGFLFSPPLPRAEFEAQYFSSAHHVS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggtggcagtagttgcactggtgactatctgtatttttatcatccttcagttg
ttccactttgtgcaacagcgtaaagatgattatgccaaccagttggaaagtattgcttat
tcggttcgccaacccctatctgaggccatactcagcgttgatattccacaagctaaaaaa
atcctcaacagcctattacctattggtattcttagccgtgctgaagtgatattaccgaac
caaatacaggtattgcacgcaaactttccaacagagcggcccattccacactgggccaag
cgggttttctccttgcccgtacagataaccgtgcctttatatgcgttggaacgggtaccc
gcaaaccctcagcccttagcgcatttagtcctgcgtgctgactctttccgtatgtatcaa
tttattctcagcgctctgtcagccatgctctcaacatatttgttactggcattggtgtta
tcggtatctatcgcttggtgtattaatcgcctgattattcacccgctgcgggcaatggcc
aaagagctggaggatattggtgaccacggggtgctgcatcatcaactgacgctaccggcg
catcatcaggatgatgaactgggtgtgttggtgcgtaattacaaccgcaatcagcaactg
ttagcggatgcctatgctgatatgggccgcattagtcaccgtttcccggtgactgaattg
cccaatcggtcattatttatcagcctgctggagaaagaaattgcctccagtacgcgtaca
gatcactttcatctgttggtgattggtattgaaaccctgcaagaggtttctggcgccatg
agtgaagcccagcaccaacagttattgttgacgatagtacagcggatcgagcagtgcatt
gatgacagcgacctgttagcgcaactgagtaaaactgaatttgccgtgttagccagaggt
acccgccgctcattcccagccatgcaattggctcggcggattatgtcgcaagtgacccaa
ccgctgtttttcgacgagataacattgcgccccagtgccagtattggtatcacccgctat
caggctcaacaggacactgccgaatccatgatgcgcaatgccagtacagcaatgatggcg
gctcatcatgaggggcgtaatcagataatggtatttgagcctcatttgattgaaaaaacg
cacaagcggctgacgcaggaaaatgacctcttacaggcgattgaaaaccacgatttcacg
ttattcttacaacctcaatgggatatgaagcgccagcaggttatcggtgcggaggcgcta
ctgcgttggtgccaaccagatggcagctacgttttaccgtcaggctttgttcacttcgcc
gaagaggaggggatgatggtgccactggggaactgggtgctagaagaagcctgccgtatt
ctggctgattggaaagcacgcggtgttagcctgccgttatcggtgaatatatcgggctta
caggtacaaaataaacagttcttgccgcatttgaaaacgctcattagccactatcatatt
gatccacaacaattgttactggaaattaccgaaactgcccagattcaggatctcgatgaa
gcattgaggctactgcgtgagttacaggggctggggttattgatcgcgttagatgatttt
ggtattggctactcaagcttacggtatcttaaccacctgaaaagcttgcctatccatatg
attaagttggataagagctttgtgaaaaatttgccagaggatgacgcgatagcgcgcatt
attagctgtgtttctgatgtactaaaggtacgtgtgatggccgaaggggtcgaaacagaa
gagcagcgccaatggttgctagagcatggcattcaatgcggccaaggcttccttttctct
ccgccactgccacgtgcagaatttgaagcccagtatttcagcagcgctcaccacgtaagt
taa
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