Yersinia pseudotuberculosis YPIII (serotype O 3): YPK_3250
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Entry
YPK_3250 CDS
T00665
Name
(GenBank) thiamine biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ypy
Yersinia pseudotuberculosis YPIII (serotype O:3)
Pathway
ypy00730
Thiamine metabolism
ypy01100
Metabolic pathways
ypy01240
Biosynthesis of cofactors
ypy04122
Sulfur relay system
Module
ypy_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ypy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
YPK_3250
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
YPK_3250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypy03016
]
YPK_3250
Enzymes [BR:
ypy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
YPK_3250
Transfer RNA biogenesis [BR:
ypy03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
YPK_3250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
tRNA_Me_trans
NAD_synthase
Motif
Other DBs
NCBI-ProteinID:
ACA69519
UniProt:
B1JID5
LinkDB
All DBs
Position
complement(3553868..3555319)
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AA seq
483 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTTNIRNVLKHLEDDTLAIVRHWDHIELRTKDDNL
GPEICDALTRIPGIHHILEVEDRSYSDMHNIFEQTLEAYRETLVGKTFCVRVKRRGKHEF
SSGDVERYVGGGLNQHIESAKVNLTRPQVTVNLEVDQDKLILVKARHEGLGGFPIGTQED
VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGSAHEIGVKQVAHYLWNRFGSSHRVRF
IAIDFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQALVTGEALGQVSSQTLT
NLRLIDNASDTLILRPLISHDKEHIINLARQIGTEDFAKTMPEYCGVISKSPTVKAVKAK
IEEEESHFDFSILDRVVSEAKNVDIREIAQQSREQVVEVETVAELADTDVLLDIRAPDEQ
EEKPLKLDQVEVRSLPFYKLSSQFADLDQSKTYLLYCDRGVMSRLQALYLREQGYTNVKV
YRP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccagaaatcaccatcaagagtcaatctgtgcgattg
cgcttcattaagatcctgactaccaatatccgcaacgtactgaaacaccttgaggacgat
accctcgccattgttcgtcattgggatcatatcgagcttcgtaccaaagatgacaatctt
ggcccggagatttgtgatgcactgacccgcataccgggtattcaccatatccttgaagta
gaagatcgtagctacagcgatatgcacaatatttttgaacaaacgctggaagcctaccgg
gagacactggttgggaagactttctgtgttcgggtaaaacgtcgtggcaagcatgaattc
tcttctggtgatgttgaacgatatgtcggtgggggtctgaatcaacatattgaaagtgct
aaagtaaacctgacccgcccacaggtgacggttaatttggaagttgatcaagacaaactg
atcttggttaaggcacgtcatgaagggctggggggcttccctatcggcactcaggaggat
gttctctccctgatttcaggcggttttgattcaggtgtatcgagctatatgctgatgcgc
cgtggctgtcgtgtccattattgtttctttaatctcggtggctcagcccatgagataggt
gttaagcaggtggcacattatctgtggaatcgctttggcagctcccatcgagtacggttt
atcgccattgattttgaaccggttgttggcgagatcctggaaaaagttgaagatggccag
atgggcgtagtattgaagcgcatgatggtgcgcgcagcttctcaggttgctgaacgctat
ggtgttcaggctttagttaccggtgaggcgctggggcaggtatccagccagacactgact
aacctgcgtttaattgataatgcctcggataccctaattttgcgcccgcttatctcccac
gataaagagcacatcattaatttggcacggcagattggtacggaagattttgctaaaacc
atgccggaatattgtggcgttatttcaaaaagcccaacggtaaaagcggtcaaagctaaa
atcgaagaagaggagtctcactttgatttctctattctggatcgggttgtgagcgaagct
aaaaatgttgatatccgtgaaatcgcacagcaaagccgtgaacaagtcgttgaagttgaa
accgttgctgaattggccgataccgatgtgttgctagatattcgtgcgcctgatgaacag
gaagagaagccactgaaactggatcaggttgaagtgcgatcactgccgttctataagctc
agctcgcaatttgccgatctggaccagagtaaaacctatttgctgtattgtgatcgcggt
gtgatgagccgtttgcaggccctttatttgcgtgagcaggggtataccaacgtgaaagtc
tatcgcccttag
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