Yokenella regensburgei: HEC60_17350
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Entry
HEC60_17350 CDS
T06519
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
yre
Yokenella regensburgei
Pathway
yre00540
Lipopolysaccharide biosynthesis
yre01100
Metabolic pathways
yre01250
Biosynthesis of nucleotide sugars
Module
yre_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HEC60_17350 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yre01005
]
HEC60_17350 (rfaD)
Enzymes [BR:
yre01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HEC60_17350 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
yre01005
]
Core region
HEC60_17350 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
QIU90956
UniProt:
A0A6H0KEY2
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All DBs
Position
3591791..3592723
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLSIADYMDKEDFLIQI
MAGEEFGEIEAIFHEGACSSTTEWDGKYMMDNNYQYSKEVLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKLLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFTGSDSFKRDFVYVGDVAAVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHQKGSIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMTWLNQDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttactggcggcgcaggctttatcggtagcaacattgttaaagctctgaat
gataaaggtatcactgacattctggtggtcgacaacctcaaagacggcaccaaattcgtc
aatctggttgatctgagcatcgccgattacatggataaagaagacttcttaatccagatt
atggccggtgaagagtttggtgaaatcgaagccattttccacgaaggcgcctgctcctcc
accactgagtgggacggcaagtacatgatggataacaactatcagtactctaaagaagtg
ctgcactactgcctggagcgtgaaatcccgttcctgtacgcttcttctgctgcgacctac
ggcggtcgcacttcagacttcatcgagtctcgcgaatatgagaagccgctgaacgtctat
ggctactccaagctgctgtttgatgaatatgtccgccagatcctgccggaagcgaactca
cagattgtcggtttccgttatttcaacgtgtacggtccgcgtgaaggccacaagggcagc
atggcaagcgttgctttccatctgaatacccagttgaacaacggcgaaagtccaaaactg
tttacaggcagcgacagcttcaaacgtgatttcgtttacgtcggcgacgtggccgcggtc
aatctgtggttcctcgaaaacggcgtttccggcatcttcaacctcggtaccggccgcgcg
gaatccttccaggcagtagcggatgcaacactggcttaccatcagaaaggcagcatcgag
tacatcccattcccggataaactgaaaggccgctatcaggcgttcactcaggccgatctg
accaacctgcgcgccgcgggctacgataagccgtttaaaaccgtcgccgaaggtgtgacg
gaatacatgacctggctgaaccaggacgcgtaa
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