Yersinia rohdei: CH64_2859
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Entry
CH64_2859 CDS
T03610
Symbol
fadB
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
yro
Yersinia rohdei
Pathway
yro00071
Fatty acid degradation
yro00280
Valine, leucine and isoleucine degradation
yro00310
Lysine degradation
yro00362
Benzoate degradation
yro00380
Tryptophan metabolism
yro00410
beta-Alanine metabolism
yro00640
Propanoate metabolism
yro00650
Butanoate metabolism
yro00907
Pinene, camphor and geraniol degradation
yro00930
Caprolactam degradation
yro01100
Metabolic pathways
yro01110
Biosynthesis of secondary metabolites
yro01120
Microbial metabolism in diverse environments
yro01200
Carbon metabolism
yro01212
Fatty acid metabolism
Module
yro_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CH64_2859 (fadB)
00650 Butanoate metabolism
CH64_2859 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CH64_2859 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CH64_2859 (fadB)
00310 Lysine degradation
CH64_2859 (fadB)
00380 Tryptophan metabolism
CH64_2859 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CH64_2859 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CH64_2859 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CH64_2859 (fadB)
00930 Caprolactam degradation
CH64_2859 (fadB)
Enzymes [BR:
yro01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CH64_2859 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CH64_2859 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CH64_2859 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CH64_2859 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AJJ11139
LinkDB
All DBs
Position
complement(3187768..3189957)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQSETLQLHWLENGIAELVFDAPGSVNKLDTKTVANLGEALAVLEKQNELKGLLLRSA
KAAFIVGADITEFLSLFNAPPEKLHQWLVFANDIFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRVASPETRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIIAKDALK
IGLVDAVVAPEKLADAALTMLKQAIDGKLDWQAARRPKLEPLKLNPTEATMCFTIAKGMV
MQVAGKHYPAPLTAVKTIEAAAKLGRAEALKLETNSFVPLAGSNEARALVGIFLNDQYVK
GKAKKLAKGISAPKQAAVLGAGIMGGGIAYQSALKAVPVIMKDINEASLTLGMNEAAKLL
NKQLERGKIDGLKMANILATIQPTLDYAGIERAQVIVEAVVENPKVKAAVLAEVETLIGE
DTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGTKTSDKTIATVVAY
ATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAVGFADRMDKDYRDAVDVMFDNQRFGQKNGQGFYRYTQDAKGKP
RKENDEQVDVLLAAVSQPRQQFSDDAIIARTMIPMINEVVRCLEEGIIASPAEGDMALVY
GLGFPPFHGGVFRYLDTIGSANYVEMAQRYVHLGALYHVPAGLRAKAEHNETYYPVAAAL
LDVSTSQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaagcgaaacactacagcttcactggttggaaaacggcattgccgagttg
gtgtttgatgcaccgggttcagtaaataaactggataccaaaactgtagccaatctgggt
gaagccctggctgtgctggaaaaacaaaacgagctcaaagggttgctgctgcgttccgcc
aaggccgcatttattgtcggtgccgatatcaccgagtttttatccctgtttaatgcgccg
ccagaaaaactgcaccaatggctggttttcgcgaacgatattttcaatcgtttggaagac
ttaccggtgccaaccatttctgccatcaatggatacgcactcggtggcgggtgtgaatgt
attttggccacggattttcgtgttgcctcaccagaaacccgtattggcttgccggaaacc
aaactcggcatcatgccaggttttggcggctcagttcgcttaccacggttattaggcgca
gacagcgcattagaaatcattgcagctggcaaagatattattgctaaagatgccctaaaa
attgggttggttgatgcggtggtcgcaccagagaaactggcagatgcggcattaactatg
ctgaaacaggccattgacggaaaacttgactggcaagccgctcgccgcccgaaattggaa
ccactcaaactcaacccaactgaagccaccatgtgctttaccattgccaaaggcatggtt
atgcaagtggccgggaagcactacccagcacctttgaccgccgttaaaaccatcgaagct
gccgcaaaattgggtcgggccgaggccctgaaactggaaactaacagtttcgtgccattg
gcgggctctaatgaagctcgtgcactggttggcattttccttaatgaccagtatgtaaaa
gggaaagcaaaaaaactcgctaaaggcataagtgcgccaaaacaagccgcagtgctgggt
gccgggattatgggcggcgggattgcctatcaatcggcactgaaagcagtaccggtcata
atgaaagatattaatgaagcatcgctgactctggggatgaatgaggcggccaagctactg
aataagcagttggaacgcggaaaaatagatggcctgaaaatggcaaatattttagcgacc
atccaaccaacactggattacgccggcattgaacgcgcacaagttattgtggaagcggtg
gtggaaaatccaaaagtgaaagccgccgtcctggcggaagtggaaacactgattggcgaa
gacacagttttagcctctaacacatcaaccattccaatcgatcaattagctaaatcactt
aaacgcccagaaaacttctgcggtatgcatttcttcaacccggtgcatcggatgccgttg
gttgaaattatccgtggtacaaaaacctcagataaaactattgctaccgtagtggcatac
gccacgcaaatgggtaaaaccccaattgtggtgaatgattgccctggcttctttgttaac
cgcgttttattcccgtatctggcagggtttggcatgttagtcagagatggcgctgatttc
cgtcaaattgataaagtgatggaaaaacaatttggctggccaatgggccctgcttatcta
ttagatgtggtgggcattgataccgcgcaccatgcacaagccgtgatggcagtgggtttc
gcagaccggatggacaaagattatcgcgatgctgttgatgttatgtttgataatcaacgg
tttggccagaaaaatggtcaaggtttctatcgttacactcaggatgccaagggcaaaccg
cgcaaagagaatgacgagcaagtcgatgtgctgctggctgctgtcagccaaccaaggcag
caattcagcgacgacgccattattgcccgcaccatgatcccaatgatcaatgaggtcgtg
cgctgtctggaagaaggcattattgccagcccggctgaaggggatatggcgctcgtttac
ggtcttggtttcccgccattccacggcggcgtcttccgctatcttgataccatcggcagt
gcaaattatgtcgaaatggcacagcgctatgtccaccttggtgcgctgtatcacgtccct
gcggggctgagagcgaaagctgaacataacgaaacttattatcccgtggcagcagcgctg
cttgatgtttctaccagtcaaccggcatga
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