Yersinia ruckeri YRB: BD65_3184
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Entry
BD65_3184 CDS
T03611
Name
(GenBank) cys/Met metabolism PLP-dependent enzyme family protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00260
Glycine, serine and threonine metabolism
yru00270
Cysteine and methionine metabolism
yru00450
Selenocompound metabolism
yru01100
Metabolic pathways
yru01110
Biosynthesis of secondary metabolites
yru01230
Biosynthesis of amino acids
Module
yru_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BD65_3184
00270 Cysteine and methionine metabolism
BD65_3184
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
BD65_3184
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yru04147
]
BD65_3184
Enzymes [BR:
yru01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
BD65_3184
Exosome [BR:
yru04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
BD65_3184
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AJI96228
LinkDB
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Position
complement(3501310..3502455)
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AA seq
381 aa
AA seq
DB search
MAKFDTLTVHAGYTPDNTGAVMPAIYATSTFAQPAPGEHTGYEYSRSGNPTRSALEKAIA
ELENGSRGYAFASGLAACSTVLELLDQGSHIVAVDDLYGGTYRLLEKVRNRTAGLRVTYV
SPADTDGLEQAIQPDTKMIWVETPTNPLLKLADLAAIAGMAKKYQLISVADNTFASPYIQ
RPLDLGFDIVVHSATKYLNGHSDVVAGVAAVGNNPELAEQLGFLHNAVGGILDPFSSFLT
LRGLRTLALRMARHNESALRIAHWLEQQPQVEAVYYPGLESHPQHQLARKQMSGFGGMIA
VRLKGEPEYARQVIKGSHLFTLAESLGGVESLISQPYSMTHASIPLEIRLKHGITPQLLR
LSIGIEDTEDLIADLAQALAS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtttgacactctgactgtacatgcaggttataccccagataataccggtgcc
gtcatgccggcaatttatgcaacctctactttcgcccagcccgcaccgggggaacacacc
ggctacgaatattcccgcagcggtaaccccacccgcagcgcgttagagaaggctattgcc
gagctggaaaacggcagtcgtggctatgcttttgcctccggcctggccgcctgttcgaca
gtgctggaattattggatcaaggtagccatattgtggccgttgacgacctgtatggcggc
acctatcgcctgctggaaaaagtgcgcaatcgcaccgctggcctgcgcgttacctatgtt
tcaccggcagatactgacggactggaacaagctattcagccggataccaagatgatttgg
gtggaaacgccgaccaatccgttgctgaaattggccgatttagcggccatcgccgggatg
gccaagaaatatcaattaatcagtgtggcggataacacctttgcctcgccttatatccaa
cgtccactggatttaggtttcgatattgtggtgcattcagcgactaaatacctcaacggc
cattcagatgtggtggctggggtcgccgccgtaggaaataatccagaattggcagagcaa
ttaggatttttacacaacgcggttggcgggattctcgatccgttcagcagcttcctgact
ctccgtggcctacgtacactggcactgcgaatggctcgtcataatgaaagcgctttgcgg
attgcccattggctggaacagcagccacaggtagaagcggtgtattatccggggcttgaa
agccacccgcaacatcagttggctcgcaaacaaatgtctggttttggcggcatgattgca
gtacgcctgaaaggtgaaccggagtatgcccgtcaggtcatcaagggttcccatctgttt
actttagcggaaagtttggggggcgtagaaagcctgatcagccaaccctacagtatgact
catgcttctatccccttggagatccgccttaaacacggtatcacgccgcagttattacgt
ctttctatcggaattgaagacactgaagatctgatcgccgatctggcacaggcattggcc
agttaa
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