Yersinia ruckeri YRB: BD65_578
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Entry
BD65_578 CDS
T03611
Symbol
rlmA
Name
(GenBank) ribosomal RNA large subunit methyltransferase A
KO
K00563
23S rRNA (guanine745-N1)-methyltransferase [EC:
2.1.1.187
]
Organism
yru
Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yru03009
]
BD65_578 (rlmA)
Enzymes [BR:
yru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.187 23S rRNA (guanine745-N1)-methyltransferase
BD65_578 (rlmA)
Ribosome biogenesis [BR:
yru03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BD65_578 (rlmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmA_N
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransf_32
Ubie_methyltran
FtsJ
MTS
Methyltransf_23
PCMT
Methyltransf_29
PrmA
Motif
Other DBs
NCBI-ProteinID:
AJI93766
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Position
complement(626502..627356)
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AA seq
284 aa
AA seq
DB search
MSYQCPLCHQALQLNQQQWRCSNNHQFDCAKEGYVNLLPVQHKGSKQPGDSPEMMQARRA
FLDAGYYQPLQQRVAALLDERLSSDAKILLDIGCGEGYYTAAVAERLNQQRTMQVYGLDV
AKVAVRYGAKRYPSVNFCVASSHRLPFADASLDAVLRIYAPCKAEELARGVKSGGIVVTV
APGPRHLYQLKEMIYPQVQLHAENDEQLSGFEWISSESLAYPMILPGAQAMNLLQMTPFA
WRASIEIGLALAAMDNFACETDFIIRVYQRQAEAVELSEKPVTW
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcaatgtcctctttgtcatcaggcgctacagcttaatcaacaacagtggcgt
tgcagcaataatcaccagtttgattgcgccaaagagggttatgtcaatttgttaccggtg
cagcataaaggctcaaaacagccgggagacagcccagagatgatgcaggcacgacgtgcg
tttctggatgcgggttactatcagccattgcaacagcgagtggccgccttactggatgag
cgtttgtcgtcagacgctaagatattactggatattggctgtggcgaaggctattacacc
gctgcagtagcggaacgtttaaatcagcagcgaacgatgcaggtttacggtttagacgtg
gcgaaagtggcggtacgctatggtgcgaaacgttatccgtcggtcaacttttgcgtggca
tccagccatcgattgccgtttgccgatgcttcactggatgccgtattacggatttatgca
ccctgtaaggcagaagaattggctcgtggggtgaaaagcggcggcatcgtggtgacggtg
gctccgggaccacgccatttgtatcaattaaaagagatgatttatccgcaggtgcagttg
cacgcggagaatgatgaacaactttccggttttgaatggattagcagtgagtccttggct
tacccgatgattttaccgggggcgcaagccatgaatttgttacagatgacgccgtttgct
tggcgagcatcaatagaaatagggctagcattggccgcgatggacaatttcgcctgtgag
acggattttattattcgcgtttatcagcgtcaggccgaagccgtcgagctatcagagaaa
ccagtgacgtggtga
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