KEGG   Yersinia ruckeri YRB: BD65_658
Entry
BD65_658          CDS       T03611                                 
Name
(GenBank) delta-1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
yru  Yersinia ruckeri YRB
Pathway
yru00250  Alanine, aspartate and glutamate metabolism
yru00330  Arginine and proline metabolism
yru01100  Metabolic pathways
yru01110  Biosynthesis of secondary metabolites
Module
yru_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:yru00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    BD65_658
   00330 Arginine and proline metabolism
    BD65_658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:yru03000]
    BD65_658
Enzymes [BR:yru01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     BD65_658
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     BD65_658
Transcription factors [BR:yru03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    BD65_658
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH
Other DBs
NCBI-ProteinID: AJI94599
LinkDB
Position
710049..714023
AA seq 1324 aa
MGSTTMGVKLDEATRDRIKTAAQRIDRTPHWLIKQAIFNYLERLEYGADMPEIPALAAVP
LAETDDIMPQLAEAAHQPFLDFAEQILPQSVTRAAITAAYRRPETEAIPMLLEQARLPAA
LADATHKLAYGIAEKLRNQKSAHGRAGIVQGLLQEFSLSSQEGVALMCLAEALLRIPDKP
TRDALIRDKISNGNWHSHLGRSPSLFVNAATWGLLFTGRLVSTHNEAKLSSSLNRIIGKG
GEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEDKGFRYSYDMLGEAALTEADAQA
YLIAYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYERVMEQLYPRLLSLTLQ
ARQYDIGINIDAEEADRLEISLELLEKLCFEPQLAGWNGIGFVIQAYQKRCPFTIDAVID
MAQRSRRRLMIRLVKGAYWDSEIKRAQVDGLEGYPVYTRKVYTDVSYLACARKLLAVPSL
IYPQFATHNAHTLAAIYHLAGNNYYPGQYEFQCLHGMGEPLYEQVVGKVADGKLNRPCRI
YAPVGTHETLLAYLVRRLLENGANTSFVNRIADATLPLDELVADPVAAVEALAAAEGQLG
LPHPRIPLPRELYGSERTNSSGLDLSNEHRLASLSSALLTSATQVWRAEPIIDAERDQAG
VEQPVINPAEPGDIVGYVREASADEVSRALDAAAAAGPIWFATPPTERAAILVRAAEMME
AQMQSLMGILVREAGKTFSNAIAEVREAVDFLHYYAGMVRDDFSNDSHRPLGPVVCISPW
NFPLAIFSGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGIPPGVLQLLPGQGNSV
GAQLVNDARIRGVMFTGSTEVASILQRSIAGRLDPQGRPTPLIAETGGLNAMIVDSSALT
EQVVTDVVASAFDSAGQRCSALRILCIQEDVAEHTLQMLRGAMAECRMGNPERLSTDIGP
VIDSEAKAGIERHIQAMRAKGRKVYQAVQADSQDEKEWQRGTFIKPTLIELESFDELQKE
VFGPVLHVVRFQRQNLTALVDQINASGYGLTLGIHTRIDETIAHVTERAKVGNLYVNRNM
VGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLCSRPEEAVTTTLNRQDREHSQDVTARTS
LLAAHHALIGWANEQKHNDLAALGERYSELAQSGTVRLLPGPTGERNTYALLPRDRVLCL
ADNEQDILIQLTAVMSVGSQVLWPDNGIHKDLFRRLPVAVQARIALTVDWQSDKSVFDAV
IYHGDADQLRMLCEQVALRDGAIVSVQGFARGETNILLERLLVEHSLSVNTAAAGGNASL
MTIG
NT seq 3975 nt   +upstreamnt  +downstreamnt
atgggcagcacaacaatgggcgtgaaactggatgaagccacacgcgatcgtattaaaacg
gcagcacaacgtattgaccgcacaccgcactggctaatcaaacaggccattttcaactat
ctcgaacggttggaatatggcgctgacatgccggaaattcctgcattggcagcggttccg
ctggctgaaacggacgacattatgccgcaattggcagaagccgcccaccaaccttttctg
gattttgccgaacagatactgccgcagtcagtaacgcgcgcagcaattaccgccgcttac
cgccgtccagaaaccgaagccatcccaatgttgttggaacaggcacgtttacccgcagca
ctggccgatgcaacccataagctggcttacggtattgctgagaaactgcgtaaccaaaaa
agtgcccatggccgcgccggtattgtgcaaggtctactacaggaattctcactttcttca
caggaaggcgtcgcgttgatgtgcttggccgaagccctgttgcgcattcccgataaacca
acccgcgatgcgctgatccgtgacaagatcagtaatggtaattggcattcccacttaggg
cgcagcccgtcgctgttcgtcaatgcggcaacctggggtctgctgttcactggtcggctg
gtttctacgcataatgaagccaaactgtccagctcgctgaaccgtattattggcaaaggt
ggtgagccgctgatccgcaaaggtgtggatatggcaatgcgcttaatgggcgaacaattc
gttactggcgaaaccattgccgaagccttggccaacgcccgtaaactggaagataaaggt
ttccgttattcttacgatatgctgggcgaagcagcgctgacggaagccgatgcccaagcc
tatctgatcgcctatcagcaagcgattcacgccatcggcaaagcctccaacgggcgtggt
atttatgaagggccggggatttctattaagctttccgccctacacccacgctatagccga
gcccagtatgagcgagtgatggagcagttgtatccgcgcctgctgtccctgacgctacaa
gcacgccagtatgatatcggtatcaatattgatgccgaagaggccgatcgtctggaaatc
tccctcgaactgttggaaaaattgtgttttgaaccacagttggcgggttggaacggtatt
ggctttgtcattcaagcctatcaaaaacgttgtccgttcaccattgatgctgtcatcgat
atggctcagcgtagccgccggcgcttgatgattcgtttggtgaaaggggcatattgggac
agcgaaatcaaacgcgctcaagttgatggtctggaaggctatccggtctacacccgcaaa
gtgtataccgatgtctcctatctggcctgcgcccgcaaattgctggcagtgcctagccta
atctatccacagtttgccacccataacgcccacacattggcggcgatttatcatctggca
ggcaataactattatccgggtcagtacgaattccagtgcctgcacggtatgggcgaaccg
ctgtatgaacaagtggtgggtaaagtagccgatggaaaactcaaccgcccatgccgcatt
tatgcgccagtcggcactcacgaaacactattggcctatctggtgcgccgattgctggaa
aatggtgccaacacctcctttgtgaaccggattgccgatgccaccctgccgctggatgag
ctggtagccgatccggttgccgccgtggaagcgttagcggctgccgaagggcaactgggg
ctaccacatccacgcattccgttaccacgggaattgtacggtagcgagcgcacaaactct
agcggtctggatttgtcgaacgaacaccgactggcctcgctatccagtgccttgttaacc
agtgccacacaggtctggcgtgcagaaccgattattgatgccgaacgggatcaggcgggt
gttgaacaaccggtgatcaaccccgcggagccgggtgatattgtcggttatgtgcgtgaa
gccagcgccgatgaagtcagccgcgcactggatgccgccgccgctgcggggccaatctgg
tttgcgacgccaccgaccgaacgcgcggccattttggttcgagctgccgagatgatggaa
gctcagatgcaaagcctgatggggattctggtgcgcgaagccggtaaaaccttcagtaac
gccattgccgaagtgcgggaagcagttgatttcctgcactactacgccggtatggtacgc
gacgatttctccaatgacagtcaccgtccacttggcccggtggtgtgtatcagcccgtgg
aacttcccgctggcgatcttcagtggacaggttgcagccgcattggccgccggtaatagc
gtattggccaaaccagcagagcaaacgccgctgattgcggcacaagcggtacgcatcttg
ctggaagccggtattccaccgggtgtattgcaactgttgccgggtcagggtaatagcgtg
ggtgcacagctggtaaacgatgcccgaatccgcggcgtgatgttcaccggctctaccgaa
gtcgccagcattctgcagcgcagtattgcaggtcgcctcgatcctcagggtcgcccaacg
ccgttaatcgctgaaacgggtggtttaaacgcgatgatcgtcgattcctcggcactcacc
gaacaggtggtcacagatgtggtggcctcggctttcgacagcgccggtcagcgttgttct
gccctgcgcattttgtgcattcaggaagatgtggcggaacatacactgcaaatgttgcgt
ggtgcgatggctgaatgccgaatggggaatcctgaacgtctgtctaccgacatcgggccg
gttatcgatagcgaagccaaagccggtattgagcgacatattcaggccatgcgtgccaaa
gggcgtaaagtctatcaggcagtgcaggccgacagtcaggatgaaaaagagtggcaacgc
ggcacctttattaaaccgacgctgatcgagctggaaagttttgacgagttgcagaaagaa
gtctttgggccggtattgcatgtagtgcgtttccaacgtcagaacctaacggcgctggtg
gatcagattaatgcttcgggttatggcttaaccttagggattcatacccgtattgatgaa
accattgcccacgtaaccgaacgagccaaggtcggtaacctctacgttaaccgtaatatg
gtcggtgccgttgtcggtgtgcaacctttcggcggcgaaggcctgtctggcacggggcca
aaagccggtggcccgctgtatctgtaccgcttgctgtgcagccgtccagaggaagccgtc
accacaacgctgaaccgtcaggaccgcgaacactcacaggatgtgaccgcacgcacgtca
ttgctggcagcacatcatgcgttaatcggttgggccaatgagcagaagcataacgatctc
gcagcactgggtgagcgttatagcgaactggctcagagtggcaccgtgcgtctgctgcca
gggccgacgggtgagcgtaacacctatgcgttgctgccgcgcgatcgggtattgtgtctg
gcggataatgagcaggatatactgattcaactgacggcagtcatgtcggtaggcagtcag
gtattatggccggataacggtatccacaaggatctattccgtcgtttacccgtcgcggta
caggcacgcattgcattgacagtggattggcaaagtgacaaatcggtatttgacgccgtg
atttatcatggtgatgccgatcaattgcgtatgctgtgtgaacaagtggcattgcgtgat
ggcgcgattgtatcggtgcaaggttttgcccgcggagaaaccaacatcctgctggagcgt
ttattggtggagcactctctgagtgtcaacactgccgccgctgggggaaatgccagcctg
atgaccattgggtaa

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