Youhaiella tibetensis: FNA67_13145
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Entry
FNA67_13145 CDS
T06140
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
yti
Youhaiella tibetensis
Brite
KEGG Orthology (KO) [BR:
yti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yti03009
]
FNA67_13145 (rimO)
Enzymes [BR:
yti01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FNA67_13145 (rimO)
Ribosome biogenesis [BR:
yti03009
]
Prokaryotic type
ribosomal protein modification factors
FNA67_13145 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QEE21063
UniProt:
A0A5B9DPI2
LinkDB
All DBs
Position
2719889..2721337
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AA seq
482 aa
AA seq
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MLRGAPALAANRAARKHDRGRNIPLSDNTLANKPFDVSAKTGQAPKIGMVSLGCPKALVD
SERILTTLRAQGYTFSRDYAGSDIVIVNTCGFLDSAKAESLEAIGEALGENGKVIVTGCL
GVEKDLIQQVHPGVLAVTGPHQYEEVVEAVHEHLPPVPNKFVDLLPEQGLRLTPRHYAYL
KISEGCNNRCSFCIIPQIRGDLVSRPAASVLYEAERLVKSGVKEILVISQDTSAYGVDIK
YATSPFHGRQVSAKFLDLSRELGELGAWIRLHYVYPYPHVDAVIPLMAEGKVLPYLDIPF
QHASPTVLKSMRRPANQEKTLDRIKRWREICPDLTIRSNFIVGFPGETEEDFEFLLDWVE
EAEVDRAGCFEYEPVTGAPANELEGVVPDEVKRERFERLMEVAQDVSTARLAKKVGRTIQ
VLVDDVQPEANRAIARSKWDAPDIDGTVIIDNATGIKPGDLVDVTVTDSDEYDLFAEPAK
AN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
attttgcggggcgcgccagctttggcggccaaccgcgcagcgcggaaacatgaccgcggc
aggaacattccattgagcgacaacaccctggctaacaagccattcgacgtttcggccaag
accggccaggcccccaagatcggcatggtcagcctcggctgccccaaggccctggtggat
tctgaacgaattctgacaacgctacgcgcccagggttacaccttctcgcgcgactatgcg
ggctcggacatcgtcatcgtcaacacctgcggcttcctcgacagcgccaaggccgaaagc
ctcgaggcgatcggcgaagccctgggcgagaacggcaaggtgatcgtcacgggttgcctg
ggcgttgaaaaggacctcatccagcaggtgcacccgggcgtgttggccgtgaccggcccg
caccagtacgaggaagtcgtcgaggccgtgcatgagcacctgccgccggtaccgaacaag
ttcgtcgacctgctgcccgagcaggggctgcgcctgaccccgcgccactacgcctatctc
aagatttccgagggctgcaacaaccgttgctcgttctgcatcatcccgcagatccgcggc
gaccttgtctcgcgccccgccgccagcgtgctttacgaagccgagcggctggtgaagtcg
ggcgtcaaggaaatcctcgtgatctcccaggacaccagcgcctatggcgtggatatcaag
tacgccaccagccccttccacggccggcaggtctcggccaagttcctcgacctctcccgt
gagctgggcgaactgggcgcctggatccggctccactacgtttacccctacccccatgtc
gacgccgtcattccgctgatggcggagggcaaggtgctgccttacctcgacattccattc
cagcacgcgtccccgaccgtgctcaagtcgatgcgccgcccggccaaccaggaaaagacc
ctggaccggatcaagcgctggcgcgaaatctgcccggacctcaccatccgctccaacttc
atcgtcggcttccccggcgaaacggaagaggatttcgagttcctgctcgactgggtcgaa
gaagccgaggtcgaccgcgccggttgcttcgaatacgagccggtgaccggtgctcccgcc
aacgagctcgagggcgtcgtccccgacgaggtcaagcgcgaacgcttcgagcgcctgatg
gaagtggcccaggacgtctccacggcccggcttgccaagaaggtcggccgcaccatccag
gtgctggtcgatgatgtgcagccggaggccaaccgcgccatcgcccgctccaagtgggat
gcgcccgatatcgacggcacggtcatcatcgacaacgccaccggcatcaagcccggcgac
ctcgtggatgtgacggtaacggactcggacgagtacgacctgttcgcggagccggccaag
gcgaactga
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