Zalophus californianus (California sea lion): 113908283
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Entry
113908283 CDS
T07874
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04721
Synaptic vesicle cycle
zca04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
113908283 (SLC6A4)
04721 Synaptic vesicle cycle
113908283 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zca02000
]
113908283 (SLC6A4)
Transporters [BR:
zca02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
113908283 (SLC6A4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
113908283
NCBI-ProteinID:
XP_027424330
EnsemblRapid:
ENSZCAG00025020592
UniProt:
A0A6J2AXF2
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All DBs
Position
16:16822844..16858646
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AA seq
630 aa
AA seq
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METTPLNSQKELSACKDKEDCQENGVLQKGVPVPEDKVESDHISNGYSAVPSPGAGDDSQ
HSIPAATTALVAEAHQGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCTNSWNTGNCTNYFSGNNVTWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGVSWQLTLCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWEKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWTKRREWFVLGVVITCFFGSLAT
LTFGGAYVVKLLEEYATGPAVLTVALIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYIAYRLIIT
PGTFKERIIKGITPETATEIPYGDIHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcccttaaattcccagaaggagctatcggcgtgtaaggataaagaagat
tgtcaggaaaatggagttctgcagaagggtgtccctgtccctgaggataaagtggagtct
gaccacatctccaacgggtactcagcagtgccgagccctggtgccggagatgactctcag
cactccattccggccgccaccaccgccctagtggctgaggctcatcaaggggaacgggag
acctggggcaagaagatggatttcctcctctcggtcattggttatgccgtggacctgggc
aacgtctggcgctttccctacatctgttaccagaacggagggggggcattcctcctgccc
tacacgatcatggccatttttggggggatcccactgttctacatggagctcgcactgggc
cagtaccaccgaaatggatgcatttctatatggaggaaaatctgcccgattttcaaaggg
atcggttacgccatctgcatcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcaccgaccagctgccctggaccagctgc
acgaactcctggaacactggcaactgcacaaactacttctccgggaacaacgtcacctgg
acgctgcactccacgtcccccgcagaagaattttacacgcgccacgtcctgcagatccat
cggtctaagggacttcaggacctggggggggtcagctggcagctcaccctctgcatcatg
ctgatcttcactgttatctacttcagtatctggaagggtgtcaaaacgtctggcaaggtg
gtatgggtgacagccaccttcccttatatcatcctctcggtcctgctggtaaggggagcc
accctccctggagcctggaggggtgttctcttttatttgaaacccaactgggagaaactc
ctggagacaggggtatgggtagatgctgccgctcagatcttcttctctcttggtcctggc
tttggggtcctcttggctttcgctagctacaacaagttcaacaacaactgttaccaagat
gccctggtgaccagcgtggtgaactgcatgacgagcttcgtttccggatttgtcatcttc
acggtgctcgggtatatggccgagatgaggaacgaggatgtgtccgaggtggccaaagac
gcaggccccagcctcctcttcatcacgtatgcagaggccatagccaacatgccagcatcc
acgttctttgccatcatcttcttcctcatgttaatcacactgggcctggacagcaccttt
gcaggcttggagggggtgatcacagctgtgctagatgagtttccgcacatctggaccaag
cgccgggagtggtttgtgcttggtgtggtcattacctgcttctttggatccctggccacc
ctgacttttggaggggcctacgtggtgaagctgctggaggagtatgccacggggcccgcg
gtgctcaccgttgcgcttatagaggcggttgctgtgtattggttttatggcatcactcag
ttctgcagtgacgtgaaggaaatgctcggcttcagccctgggtggttttggaggatctgc
tgggtagccatcagccctctctttctcctgttcatcatttgcagttttttaatgagcccg
ccacagctccgacttttccagtataactatcctcagtggagtatcatcctgggttactgc
ataggaacctcatctttcatctgcatccccacatatatagcttaccggctgatcatcact
ccagggacatttaaagagcgtattattaaaggtatcactccagaaacagcgacagaaatt
ccctatggggacatccacttgaatgccatataa
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