Zalophus californianus (California sea lion): 113908297
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Entry
113908297 CDS
T07874
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03440
Homologous recombination
zca03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113908297 (BRIP1)
03460 Fanconi anemia pathway
113908297 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zca03400
]
113908297 (BRIP1)
Enzymes [BR:
zca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
113908297 (BRIP1)
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
113908297 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
113908297 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
113908297
NCBI-ProteinID:
XP_027424358
EnsemblRapid:
ENSZCAG00025022092
UniProt:
A0A6J2B3B7
LinkDB
All DBs
Position
16:complement(26133120..26310366)
Genome browser
AA seq
1215 aa
AA seq
DB search
MMSSVWSEYTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCS
ALAWQQSLSGKPVDESLNKKAEVPSSCCCVCHSKNFINIDLSQGTSHHFNSPSTPPSERN
DTSSTCQDSPEKTTLAAKLSAKKQASIKRDENDDFQVEKKRIRPLETTQQIRKRHCFEKE
VHHLDSKVASGKTTKLNSPLGKINSFSPQNPPGHCSRCCSTKQGSSQDSSSTTKKDHGGK
SKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCME
LRDGRNGKSCYFYHGLHKISDQHTLQTLQGMCKAWDIEELVSLGKKLKACPYYTARELIE
DAHIIFCPYNYLLDAQIRESMDINLKEQIVILDEAHNIEDCARESASYSVTEVQLRFARD
ELDSMVNNNIRKKDHEPLRAVCYSLINWLEANSEHLMERDYESSCKIWSGSEMLLNLHKM
GITTATFPILQGHFSAVLQKEEKVLPMHGKEEARVVPIISASTQIMLKGLFMVFDYLFRQ
NSRFADDYKVAIQQTYSWINQIDTSDKNGFFALAKNKKRSRQKIAVHVLNFWCLNPAVAF
SDINGKVWTIVLTSGTLSPMKSFSSELGVTFTVQLEANHVINNSQVWVGTIGSGPKGRNL
CATFQHTETFEFQDEVGELLLSVCQTVSQGILCFLPSYKLLEKLKERWLYTGLWHNLELV
KTVIVEPQGGEKTDFDELLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVI
TIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYDIQAYRALNQALGRCIRHKNDWG
ALILVDDRFRSNPSRYISGLSKWVRQQIQHHSTFESALESLAEFSKKHQKVIDVSEEDRK
FLQDSESTLEVTHLKDNSLTYLSEAASHLAPENPGKGEAKMCVQERQCPTITKSPSLPRG
IISRKERDDPVLLEESAQAVKAEKIVISRSTSPTFSKQTKRANWSSFNSLGHYLTGEILT
AAPKFRSPEDYTSSVSTFKTEKGCKTVLPLTDKCESSSLTVNASFVPCPQSESTISSIKI
DSNLLKKNDSKQLSCCEEALDPDIELSLVGEEAELSTSHRASETEAEDESIYFSPELYDP
MDTNEEKNDLVESDRDNRLANHSNCILVEDLFEIRTMKGVDSVQEMKAEDCTDTKLNRLM
HIKESKIDNIGSNVM
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcagtttggtctgaatatacaattggtggggtgaagattacctttccttat
aaagcttacccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaag
caacattgtttgttggagagccctacaggaagtgggaaaagcttagccttactttgttct
gctttagcatggcaacagtctcttagtgggaagccagtggatgaaagcttaaataaaaaa
gctgaagtaccatcatcatgttgttgtgtatgccattcaaagaattttataaacattgac
ttgagccaaggaacttcacatcatttcaacagtccaagtacaccaccttctgaaagaaat
gacacttcatcaacttgtcaagactctcctgaaaaaactacgctggctgcaaagctatct
gccaagaaacaggcttccataaaaagagatgaaaatgatgattttcaagtagagaagaaa
agaattcgacccttagaaaccacacagcagattagaaagcgtcattgttttgaaaaggag
gtacatcatttggattcaaaagttgcttcaggaaagaccacaaaactcaactctccatta
ggaaagataaactccttttctccacaaaatccccctggtcactgttccaggtgttgttct
actaaacaaggaagcagtcaagattcctccagtacgactaagaaggatcatggggggaaa
tccaagatacccaaaatatattttgggacacgcacacacaaacagatagctcagattact
agagagctccggaggacagcgtactcaggggtcccaatgactattctttccagcagggat
catacttgtgtccatcctgaagtagtaggtaacttcaacagaaatgaaaagtgcatggaa
ttgcgggatggaagaaacggcaaatcctgctatttttatcatggtttacataaaattagt
gatcaacacacattacagactcttcaaggaatgtgcaaagcctgggatatagaagaactt
gtcagtttgggaaaaaaactaaaggcatgtccatattacacagcacgagaactaatagaa
gatgctcacataatattttgtccttacaactatcttctagatgcacaaataagggaaagt
atggatatcaatctaaaagaacagattgtcattttagatgaagctcataacattgaagac
tgtgctcgggaatcagcaagttacagtgtaacagaagttcagcttcggtttgctcgagat
gaactagatagtatggtcaataataatataaggaagaaagaccatgaacctctacgagct
gtgtgctatagcctaattaattggttagaagcaaattctgaacatcttatggaaagggat
tatgaatcatcctgtaaaatatggagtggaagtgaaatgctcttaaatttacacaaaatg
ggcatcaccactgctacttttcccattttgcagggacatttttctgctgtccttcaaaaa
gaagaaaaagtcttaccaatgcatggtaaagaggaggcaagagtagtaccgattattagt
gcttcaactcaaataatgctcaaaggactttttatggtgtttgactatctttttaggcaa
aatagcagatttgccgatgattataaagttgctattcaacagacttattcttggataaat
cagattgatacttcagataaaaatggattctttgctctggcaaaaaataagaaacgttca
agacagaaaattgcagttcatgtgctaaacttttggtgcttaaatccagctgtggccttt
tcagatattaatggcaaagtttggacaattgttttgacatctgggacattatcaccaatg
aaatccttttcatcagaacttggtgttacattcactgtccaactggaggctaatcatgtc
attaataactcacaggtttgggtgggcaccattgggtcaggccccaagggtcgtaatctc
tgtgctaccttccagcacacagaaacatttgagttccaggatgaagtaggcgaacttttg
ttgtctgtgtgtcagactgtgagccaaggaattttgtgtttcttgccatcttacaagtta
ttagaaaagttaaaagaacgttggctctacactggtttatggcataatctagagttggtg
aagacagtcatcgtagaacctcagggaggagaaaaaactgattttgatgaattactgcag
gtgtactatgatgcaatcaagtacaaaggagagaaagatggagccctcttggtagcagtt
tgtcgtggtaaagtgagcgagggcctggatttctcagatgacaatgcccgtgctgtcata
acaatagggattccttttccaaacgtgaaagatctacaggttgaactaaagcgacaatac
aatgatcagcactcaaaattgagaggtcttttacctggccgtcagtggtatgatattcaa
gcatatagggccttaaaccaggccctaggtaggtgtattcgacacaaaaatgattgggga
gctcttattctagtggatgatcgtttcaggagtaatcccagtcgatatatatctggactt
tctaaatgggtacggcagcagattcagcaccattcaacctttgaaagtgcactggagtcc
ttggctgaattttccaaaaaacaccagaaggtcattgatgtatccgaagaggacagaaag
tttttacaggacagtgagtctacacttgaagtgacccatttgaaggacaatagtttaact
tatttatcagaagcggcaagtcatctagcaccagaaaatcctgggaaaggtgaagcaaaa
atgtgtgtccaagaacgacagtgtcctacaataactaaaagtccatctctaccaagaggt
atcatttccagaaaggaaagagatgatcctgtattattggaagagtccgcccaggcagtg
aaagcagaaaaaattgtgatttccagatccacaagcccaaccttcagcaaacagacaaag
agagctaattggtctagctttaattctttgggacattatcttactggtgaaattctgact
gcagcacctaagttcaggtcaccagaggactatacctccagtgtctccactttcaaaaca
gaaaagggatgtaaaacagttttgccactcactgataaatgtgagtcctcatctctgacg
gtaaatgcatcatttgtaccatgccctcaatcagaaagtactatttcatcaataaagatt
gattctaatcttcttaaaaaaaatgattccaaacagctgtcctgctgtgaagaagccctg
gatccagacattgaattgtctctagttggtgaagaagctgaactttccacttcacacaga
gcttctgaaacagaagcagaggatgaatctatctatttttcacctgagctatatgatcct
atggatacaaatgaagaaaagaatgatctagttgaaagtgatagagacaatagattggct
aatcattccaattgcattttagttgaagatctttttgaaattagaactatgaaaggagtg
gattcagtccaagaaatgaaagctgaggattgcacagacacaaagttgaatagactcatg
catattaaagaaagtaaaatcgataacatcggtagtaatgtaatgtaa
DBGET
integrated database retrieval system
