Zalophus californianus (California sea lion): 113922868
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Entry
113922868 CDS
T07874
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zca03016
]
113922868 (TRDMT1)
Enzymes [BR:
zca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
113922868 (TRDMT1)
Transfer RNA biogenesis [BR:
zca03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
113922868 (TRDMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
113922868
NCBI-ProteinID:
XP_027451015
EnsemblRapid:
ENSZCAG00025012743
UniProt:
A0A6J2D817
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All DBs
Position
9:124472049..124528417
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AA seq
417 aa
AA seq
DB search
MTAGVPRNWPAQGLGCTGAGFCTWNSRTCSQKADLSRQPQQTQHLARESCIPARVVAAID
VNTVANEVYKYNFPHTQLLAKTIEGITLEEFDKLSFNMILMSPPCQPFTRIGLQGDVTDP
RTNSLLYVLGILPRLQKLPKYILLENVKGFEVSSTRDLLIQALENCGFQYQEFLLSPTSL
GIPNSRLRYFLIAKLQSEPLPFQVPGQVLMEFPKIESEHPERNTIVTENKIERKKIEPSI
CFDKSRQRSGKEAILFKLETVEEIDRKHHQDSDLSVQMLKDFLEDDIDVNQYFLPPKSLL
RYALLLDIVKPTCRRSTCFTKGYGSYIEGTGSVLQTTEDVQIEDIYKSLTNLSQEEKITK
LLMLKLRYFTPKEIANLLGFPSDFGFPEKITVKQRYRLLGNSLNVHIVAKLIKILYE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaggcgtcccccgaaactggccggcacaggggctcggctgcacgggcgccggt
ttctgtacttggaactccaggacctgctcgcagaaggctgacttatctcggcaaccccag
cagacacaacacctggcacgtgaaagctgtatacctgcacgagtggtggctgccattgat
gtgaacactgtcgctaatgaagtatacaagtataattttcctcacacacagttactggcc
aagacaattgaaggcattacgctagaggagtttgacaaattgtctttcaatatgatttta
atgagccctccctgtcaaccattcaccagaattggcctgcaaggtgatgtgactgatcca
aggacgaatagcctcttatatgttctaggtattctcccaagattacaaaaattaccgaaa
tatattcttttagaaaatgttaaaggctttgaagtatcttctacaagagacctgttaata
caagcattagaaaattgcggttttcagtaccaagaatttctattatctccgacctctctt
ggcattccaaattcaaggctccggtatttccttattgcaaagcttcagtcagaaccatta
ccttttcaagtccctggtcaggtactgatggagtttcccaaaattgaatctgaacatcca
gaaagaaatacaatagttacagaaaataaaattgaaagaaagaaaattgaacctagtatt
tgctttgataagagcagacaacgttctggaaaagaggccattctatttaagcttgaaact
gtagaagaaattgaccggaaacatcaccaggacagtgatctctctgtgcagatgctaaaa
gattttcttgaagatgatattgacgtgaatcagtattttttaccgccaaagtcgttgctg
cgatacgctcttttgttagacattgttaagcccacttgccgaaggtccacatgctttacc
aaaggttatggaagctatatagaagggacgggatctgtgttacagacgacagaggatgtg
cagattgaggatatctacaaatcccttaccaatttgtcacaagaagaaaagataacaaaa
ttgttaatgcttaaacttcgatatttcactcctaaagaaatagcaaatctccttggattt
ccttcagatttcggatttcctgagaagataacagtgaaacagcgttatcgtctacttgga
aatagtctcaatgtgcatatagtagctaaactaatcaaaatcctatatgaataa
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