Zalophus californianus (California sea lion): 113927174
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Entry
113927174 CDS
T07874
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04064
NF-kappa B signaling pathway
zca04514
Cell adhesion molecules
zca04668
TNF signaling pathway
zca04670
Leukocyte transendothelial migration
zca04933
AGE-RAGE signaling pathway in diabetic complications
zca05143
African trypanosomiasis
zca05144
Malaria
zca05417
Lipid and atherosclerosis
zca05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
113927174 (VCAM1)
04668 TNF signaling pathway
113927174 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113927174 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
113927174 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
113927174 (VCAM1)
05143 African trypanosomiasis
113927174 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
113927174 (VCAM1)
05418 Fluid shear stress and atherosclerosis
113927174 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
113927174 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
zca04090
]
113927174 (VCAM1)
04091 Lectins [BR:
zca04091
]
113927174 (VCAM1)
CD molecules [BR:
zca04090
]
Proteins
113927174 (VCAM1)
Lectins [BR:
zca04091
]
I-type lectins (Siglecs)
113927174 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
C2-set
Ig_2
V-set
C2-set_2
Ig_6
Ig_4
ICAM_N
Ig_5
ICAM1_3_5_D2
C1-set
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
113927174
NCBI-ProteinID:
XP_027458657
EnsemblRapid:
ENSZCAG00025003806
UniProt:
A0A6J2DV80
LinkDB
All DBs
Position
4:84915592..84933140
Genome browser
AA seq
735 aa
AA seq
DB search
MVVIFGASNVLWLVFAVSQAFKMEIFPENRVVAQIGDVISLTCSTTGCEPPSFSWRTQID
SPLNGKVRNEGTNSTLTMDPVSFNNEHAYVCTATCGSKKLEKGIQVEIYSFPKDPEIHLS
GPLELEKPVTVTCLVPDVYPFDRLEINLLKGNDLLKNKEFLEPMEGKSLETKSLEATFIP
TKEDIGKALICQAKLNIDEIDFEPKERETTKKLEVYISPKNTVISANPSTRLQEGGSVTM
TCSSEGLPAPQIFWSKKLDNGNLQLLSGNATLTLIAMRIEDSGIYVCEGVNEVGKDGKEV
ELIVQEKPFTVEISPGPQVIAQIGDSVVLTCGVTGCESPSFSWRTQIDSPLSGQVKTEGT
KSTLTLSPVSFENGHSYLCTVTCGHKKLEKRISVDLYSFPRDPEIKMSSLLVSGNPVTVS
CEVPSVYPSDRLEIELFKGESIIESKTFLEDMDKKSLETKSLEMTFIPTTEDTGRVLICL
AQLHVGEMEFEPKQRQSTQTLYVNIAPRDTTILVSPSSILEEGSSVNMTCFSNGLPTPEI
LWSRQLNNGHLQPLSENSTLTLTSTKMEDSGIYVCEGINQAGISRKEVELIIQVAPKDIQ
LIAFPSESVKEGDTVIISCTCGNVPKTWIILKKKAETGDTVLKSRDGAYTIHKVQLEDAG
VYECESKNEVGLQLRSLTLDVKGRENNKDYFSPELLVLYCASSLIIPAIGMIIYLARRAN
MKGSYSLVEAQKSKV
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgatctttggagcctcaaatgtactttggctggtgtttgcagtttctcaagct
tttaaaatggagatcttccctgaaaacagagttgttgctcagattggtgatgtcatttca
ctgacttgcagtacaacaggctgtgagcccccatctttctcttggagaacccaaatagac
agtccactgaatgggaaggtgagaaatgaggggacgaattccacgttgaccatggatcct
gttagtttcaacaatgaacatgcttacgtgtgcacagcgacttgtggatctaagaaactg
gaaaaaggaattcaggtggagatttattctttccctaaggacccagagatccatctgagt
ggccccctagaactggagaagccagtcactgtcacatgtttggtccccgatgtttaccca
ttcgacaggctggagataaatctgctaaagggcaatgatctcctaaagaataaggaattt
ctagagcctatggaggggaagtccctggagaccaagagtttggaggcaaccttcattcct
accaaagaggatattgggaaagctcttatttgccaagcaaaattaaacattgatgaaatt
gactttgagcccaaagaaagggagactacaaaaaaactagaagtctacatctcaccgaag
aacacagttatctctgcaaacccctccacgaggctgcaagaaggtggttctgtgacaatg
acatgttccagtgagggtctcccagccccacagattttctggagcaaaaaattagataat
gggaatctacagctcctttccgggaacgcaactctgactttaattgctatgaggatagaa
gattctggaatttatgtgtgtgaaggagtcaatgaagtcgggaaagatggaaaagaggtg
gaattaattgttcaagagaaaccattcactgttgagatctcacctggaccccaggttatt
gctcagattggcgactcagttgtattgacatgtggtgtcacaggctgtgagtccccatct
ttctcttggagaacccagatagatagccctctgagtgggcaggtgaagactgaagggacc
aaatccacgctgaccctgagccctgtgagttttgagaatggacattcttacctgtgcact
gtgacctgtggccataagaaactggaaaagagaattagtgtggacctctactcattccct
agagatccagagatcaagatgagtagtctactagtgagtggaaacccagtcactgtgagc
tgcgaggttcctagtgtgtatccttctgaccggctggagattgaattatttaagggggag
agtatcatagagagtaaaacctttctggaggacatggacaagaaatctctggagactaag
agtttggaaatgactttcatccccaccactgaagatactggaagagttcttatttgtctg
gctcagttacatgttggtgaaatggaatttgaacccaaacaaaggcagagtacacagacg
ctttatgttaacattgcccccagggatacaaccatcttggtcagcccctcctccatcctg
gaggaaggtagttctgtgaatatgacgtgctttagcaatggccttccaactccagaaatc
ctgtggagcaggcagctaaataatgggcatctacagcctctttctgagaattcaactctt
accttaacttctacaaaaatggaagattctggtatttatgtgtgtgaagggattaaccag
gctggaataagcagaaaagaagtagaattaattatccaagttgctccgaaagacatacaa
cttatagcttttccttctgagagtgtcaaggaaggagacactgtcattatctcctgtaca
tgtggaaatgttccaaaaacttggataatcctgaagaaaaaagcagagacgggagacaca
gtgctaaagtccagagatggtgcatataccattcacaaggtccagctagaggatgcggga
gtatatgaatgtgaatctaaaaatgaggttggcttgcaattaagaagtttaaccctcgat
gttaaaggaagagaaaataacaaggactatttttctcctgaacttctcgtgctctattgt
gcatcttccttaataataccggctattggaatgatcatttaccttgctagaagagccaac
atgaaagggtcatacagtctcgtagaagcacagaaatcgaaagtgtag
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