Zalophus californianus (California sea lion): 113929417
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Entry
113929417 CDS
T07874
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca00310
Lysine degradation
zca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
113929417 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zca03000
]
113929417 (PRDM6)
03036 Chromosome and associated proteins [BR:
zca03036
]
113929417 (PRDM6)
Enzymes [BR:
zca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
113929417 (PRDM6)
Transcription factors [BR:
zca03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
113929417 (PRDM6)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
113929417 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
113929417
NCBI-ProteinID:
XP_027462116
EnsemblRapid:
ENSZCAG00025002048
UniProt:
A0A6J2E1Y0
LinkDB
All DBs
Position
5:17954893..18053797
Genome browser
AA seq
592 aa
AA seq
DB search
MLKPGEPGGSAFLKVDPAYLQHWQQLFPHGGSGGPLKGGGAAGPLGAPQPLQPPPPPPSE
RAEPPPDSLRPRPASLSSASSTPASSSTSASSASSCAAAAAAAALAGLSALPVAQLPVFA
PLAAAAVAAEPLPPKDLCLGAASGPGPSKCGGSGGDVRGGPRFRCSAEELDYYLYGQQRM
EIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSTAAAAPPPELPEWLRD
LPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGAVRNTQHLWEIYD
QDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVW
YNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFSKNSKLPPVAPQRSVVFPQ
TPCTRNFSLLDKSGPMESGFNQINVKNQRVLASPTSTSQLHPEFSDWHLWKCGQCFKTFT
QRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATT
LNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPMTESPESIEVD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggagagcccggcggctcggccttcctcaaagtggacccagcctatctg
cagcactggcagcaactcttcccgcacggcggcagcggcggcccgctcaagggcggcggc
gccgcgggtcccctgggcgcgccgcagcctctccagccgccgccgccgccgccctcggag
cgcgcagagcctccgccggacagcttgcgcccgcggcccgcctcgctctcctccgcctcc
tccactccggcgtcctcctccacctcggcctcctctgcctcctcctgcgccgccgcggcc
gccgccgccgcgctggcgggtctctcggccctgcccgtggcgcagctgccggtgttcgcg
cctctggccgccgccgccgtcgccgcggagccgctgccccctaaggacctgtgcctcggc
gccgcgtcgggcccggggccttccaagtgcggcggcagcggcggggacgtgcggggcggc
ccgcgcttccgctgcagcgcggaggagctggactattacctgtacggccagcagcgcatg
gagatcattccgctcaaccagcacaccagcgaccccaacaaccgttgcgacatgtgcgcg
gacaaccgcaacggtgagtgtcccatgcacgggccactgcactcgctgcgccggctcgtg
ggcaccagcagcaccgcggccgccgcgcccccgcccgagctgcccgagtggcttcgggac
ctgccacgggaggtgtgcctgtgcaccagcaccgtgcccggcctggcctacggcatctgt
gcggcgcagaggatccagcagggcacctggattgggcccttccagggcgtcctcctgccc
ccggagaaggtgcaggccggcgccgtgaggaacacgcagcatctctgggagatatatgac
caagatgggacactacagcactttattgatggtggggaacctagtaagtcgagctggatg
aggtatatccgatgtgcaaggcactgcggagagcagaatctaacagtagttcagtacagg
tcgaatatattctaccgagcctgtatagatattcccaggggtaccgagcttctcgtgtgg
tacaatgacagctatacgtctttctttgggattcccttacaatgcattgcccaggatgaa
aacttaaatgtcccctcgacggtcatggaggccatgtgcagacaggacgccctgcaaccc
tttagtaagaacagcaagctgccccccgtcgccccgcagcgctccgtggtcttcccgcag
actccgtgcaccaggaacttctctctcctggacaagtctgggcccatggaatcgggattt
aaccagatcaacgtgaaaaaccagagagtgctcgcgagcccgacttccaccagtcagctg
cacccggagttcagtgactggcatctctggaaatgcggccagtgctttaagactttcacg
cagcggattctcttacagatgcacgtgtgcacgcagaaccccgacagaccttatcagtgt
ggtcactgctcccagtccttctcacaaccgtccgagctgaggaaccacgtggtcactcac
tccagtgaccggcctttcaagtgtggctactgtggtcgggcctttgccggggccaccacc
ctcaacaaccacatccgaacccacactggagaaaagcccttcaagtgcgagagatgtgag
aggagcttcacgcaggccacacagctgagccggcaccagcggatgcccaatgagtgcaag
ccaatgaccgagagcccagaatcaattgaagtggattaa
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