Zalophus californianus (California sea lion): 113937251
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Entry
113937251 CDS
T07874
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113937251 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zca03021
]
113937251 (POLR1B)
Enzymes [BR:
zca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113937251 (POLR1B)
Transcription machinery [BR:
zca03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
113937251 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
113937251
NCBI-ProteinID:
XP_027477047
EnsemblRapid:
ENSZCAG00025010365
UniProt:
A0A6J2FCW9
LinkDB
All DBs
Position
8:37806715..37832930
Genome browser
AA seq
1135 aa
AA seq
DB search
MDPAGRWQNLPSGPSLKHLTDPSYGVPREQQKPALQELTRAHVESFNYAVREGLSHAVQA
IPPFEFAFKDERISLTIVDAVISPPMVPKGNICKELNIYPAECRGRRSTYRGKLTADISW
AVNGISRGIIKQFLGYVPIMVKSKLCNLHNLPPKALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFVLKALVNFSDYQIFQELIKGKEEDSFFRNSVSQMLRIVMEEGCSTQKQV
LNYLGERFRVKLSLPDWCPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAKGE
CMEDNPDSLVNQEVLTPGQLFLMFLKEKMESWLVSIKIALDKRAQKTNVSINTENLMKIF
NLGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFVRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQRVHTASVPALLCSLGVT
PVDGAPHRPYSECYPVLLDGVMVGWVDKELAPSTADSLRHFKVLREKRIPPWMEVALIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQIFMNVAIFEEEVLAGVSTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQARSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKIKQGDDSLVFGVKPGDPRVLQKLDDDGLPFIGAQLQYGDPYYSYLNLNTGESFVIY
YKSKENCIVDNIKVCSNDTGSGKFKCICITMRVPRNPTIGDKFASRHGQKGILSRLWPVE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALE
YFGELLKAAGYNFYGTERLYSGISGIELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVQCGSLLSPL
LEKPPPSWSATRNRKYNCALCDRSDTVDTVSVPYVFRYFVAELAAMNIKVKLDVI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatccggccggccggtggcagaatctgcccagcgggcctagcctaaagcacttaact
gacccgtcttacggggttccgcgggagcagcaaaagccagcgttgcaggaactgacgcgg
gcgcatgttgagtccttcaactacgctgtgcgcgaggggctcagccacgcggtgcaggct
atccctccctttgaatttgctttcaaagatgagcggatctctcttactatcgtggacgct
gtcatcagtccacccatggttcccaaagggaacatctgcaaagaactcaacatttatcca
gccgaatgccggggtcggaggagcacctatcggggcaagctgaccgctgatatcagctgg
gcagtgaatggaatctccagaggaatcattaaacagtttcttggctacgttcccatcatg
gtgaagtctaagctttgcaacttacacaaccttccccccaaagccctcattgagcaccat
gaggaagcagaggaaatgggaggctattttataatcaatggcattgaaaaagtcatccga
atgttgattatgcctcggaggaattttcccattgcaatgataagaccaaaatggaaaacc
agagggcctggctatactcagtatggcgtctcaatgcactgtgtgagggaggaacattct
gcagtcaatatgaaccttcactacttggaaaatggcactgttatgttgaactttatttat
cggaaagaactgttttttcttcctttgggatttgtacttaaggcacttgtcaacttctcc
gattatcagatttttcaggagctcatcaaaggcaaagaggaggactctttctttaggaac
tccgtttctcagatgttaaggatcgtcatggaagagggttgttccacacaaaaacaggtc
cttaactatctaggtgaacgcttcagagtaaagctcagtcttcctgactggtgtccaaat
gaacaagctgcagagtttctgtttaaccagtgcatctgtatccacttgaaatccaatact
gaaaagttttacatgctttgtctcatgacccggaagctctttgctttagccaaaggagag
tgcatggaggacaatcctgatagtttagtgaatcaggaagtcctgacgcccggtcagctc
ttccttatgtttctgaaggaaaaaatggaatcttggttagtgtctattaaaatagctcta
gacaagagggctcagaagacgaatgtgtccataaacactgaaaatttgatgaagattttt
aacctgggaacagaccttacaaaaccatttgaatatcttcttgctactgggaatctgcgt
tccaaaacaggtcttggcttcctgcaagattctggcctttgcgttgtggctgataagctg
aacttcgtacgctatctctcccatttccgctgtgtgcacagaggggccgattttgccaag
atgaggaccaccacggtgcgcaggctgctgccggagtcctggggcttcctgtgtcccgtg
cacaccccagacggggagccctgtggcctcatgaaccacttgaccgctgtgtgcgaggtc
gtcacacagcgtgtgcacacggcctctgttcccgccttgctctgcagcctgggggtcact
ccggttgacggagctccacatcgaccatacagcgagtgctaccccgtcctgctggatggc
gtcatggttggctgggtggataaggagcttgctcctagcactgcagattctcttcgacat
tttaaggtgttgagagaaaaaagaattcctccttggatggaagtggcccttatccccatg
acaggaaaaccaagtctgtacccaggattgttcctgtttaccactccttgtagactggtg
cggcccgtgcagaacttggaattaggcaaagaagaactaattggaactatggagcagatc
ttcatgaacgttgccatctttgaggaggaggttttggctggagttagcactcaccaggag
ctcttccctcacagcctgctgagtgtgatcgccaacttcatccctttctccgatcacaac
cagagtccccggaacatgtaccagtgccagatggggaagcaaaccatgggctttccactt
ctcacttaccaagctcggtcagataataaactgtaccgtcttcagactccacaaagccct
ttagtgagaccatacatgtatgattattatgacatggataactatccaattgggacaaat
gccatcgttgctgttatttcttatactggctacgatatggaagatgccatgatcgtgaat
aaggcctcctgggaacgaggctttgcccatggaagtgtctacaagtctgagttcatagat
ctgtctgaaaaaattaaacaaggagatgatagtctggtgtttggagtcaaacctggtgac
ccgcgggttttgcagaagttagatgatgatgggttgccgtttattggagcccagctacag
tatggagacccgtattacagctacctaaacctcaacaccggggagagctttgtgatatac
tataagagtaaagaaaattgcattgtggataacatcaaagtgtgtagtaatgacactggc
agtgggaaattcaagtgtatttgcatcacgatgagagtccctcggaacccaactatcgga
gataaattcgctagtcgccacgggcagaagggcatcttgagcaggttgtggccagttgag
gacatgcctttcactgagagtgggatggtcccagacatcctgttcaatcctcacggtttt
ccctcccgcatgaccatcgggatgttaattgaaagtatggcagggaagtctgctgctctg
catggtctctgccatgatgcaacacccttcaccttttcagaggagaactcggccttagag
tactttggtgagctgttaaaagccgctggctacaacttctatggcaccgagaggttgtat
agtggcatcagtggcatagaactggaagcagacattttcataggcgtggtttattatcag
cgtttacgccacatggtttcagacaaattccaggttagaaccacgggagccagagacaaa
gtcacgaaccagcctattgggggaagaaatgtccagggtggaatccgttttggggaaatg
gagcgggatgctcttttagctcatggtacatcttttctccttcatgaccgcctcttcaac
tgttcggatcgctcagtagcccatgtgtgcgtgcagtgtggtagtttactctctccgctg
ctggagaagccacccccttcttggtctgccacacgcaacagaaaatacaactgtgctttg
tgtgatcgcagtgacaccgtcgacactgtttctgtgccttacgttttccggtattttgta
gctgaactggcagctatgaacatcaaggtgaaactggacgtcatttaa
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integrated database retrieval system
