KEGG   Ziziphus jujuba (Chinese jujube): 107403749
Entry
107403749         CDS       T04794                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107403749
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107403749
Enzymes [BR:zju01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     107403749
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     107403749
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 DUF2635
Other DBs
NCBI-GeneID: 107403749
NCBI-ProteinID: XP_015866147
UniProt: A0A6P3YRQ2
LinkDB
Position
11:complement(join(11386976..11387572,11387935..11388892,11389381..11389521,11390711..11390970,11391059..11391257,11392463..11392665,11393764..11393975,11394426..11394570,11394697..11395080,11395328..11395546,11395650..11395797,11395941..11396029,11397136..11397396,11398147..11398331,11398534..11398696,11398967..11399137,11399274..11399558,11399883..11400221,11400361..11400520,11401230..11401399,11401605..11401619))
AA seq 1767 aa
MAHSEVATESVEAVQFGFMTDEDVRKHSFVKVTSPILLNDVERPIPGGLYDPAMGPLHDD
AYCISCGQRSYFCPGHCGHIDLVSPVYNPLLFDNLYDLLQRTCFSCYHFRAGRKQVEKCI
SQLELIMRGDVVGAKELDSDSPSQFSYAKDDDGRMCHSAESKQQVWTSLHFTEVMSVLKK
ILKPNSAKRDSVKQNPFKQKNKLKTTKCMNCSAKNPKISRPTFGWLHKSMSGAHIRANVI
SGSNIEGPFADGHQEASVSDEEIINDSPPWDNDVDKDNSDAFRALSPGSQSSVKKNHKTK
GSKVPNKYFKQKKSSTGPLLPSEVKEILRLLWENEAQLCSLICNIRHQGFGKKASYTMFF
LENVLVPPIKFRPPAKGGDSVMEHPQTVLLTKVLQSNIDLGNAHINNSGYAKIVSRWMAL
QQSINVMFNSKSAAGRKEMATGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYLAVN
EIGIPPYFALRLTYPERVTPWNVGKLRDAIINGSEIHPGATHYVDKLSTVRLLARKSRIS
VSRKLPSSRGGLVQHGKFCDYESEGKFVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLK
GEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRAL
IQDHIVSAVLLSKKDTFLGWEEFNQLLYSSGVSAIGSKSLSRKFGHKVFMSSSEDEVFPL
LPAIMKPEPLWTGKQVITALLNHITKGFLPFSVEKDTKVPRDFFNDKTEDNKSNGENEAG
NARSKKVNKRRAQKEADKDRMKMKGEPDEDKLFIYKNNLVRGVIDKAQFGEYGLVHTVQE
LYGSNTAGNLLSALSRLFTVYLQMHGFTCGVDDLLLVEVKDRERKKLLDKCDEIGEEVHC
QFVKLKTNEKLDPMILQFNIEKTIRSNGEAALASLDRKMISQLNDRTSKSEELKGLLSKG
LYKPPAKNCISLMTTSGAKGGAVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPPWDWT
SRSGGLVIDRFLSGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYD
YTVRDSDGSIIQFCYGEDGVDVHQTSFIANIEAFAANKETIYKKCHHQIDKSNAYIKNLP
PALIKKTEKFVQKLSMKQDHDLLNREGLLRLMEHKYLSSLAQPGEPVGVLAAQSVGEPST
QMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEKIKTPFMTCPLHEGISEEDAKRLADKL
KKITVADIIDRMKVSVKPFALHHDKVCRIYKLEMKLHKPEHYPKYADGSSEDWEETLSTV
FVRQLEDDIEKHVKLLSKIKGIKDFMADPKSKDSNEMEEDFSKNESHHEEDGDDDGEHGE
GTDEDLGLDAQKRKQQATDEVDYEDDANREIDEGNMSAGSDSENDESVNDETDNLGAKEE
RHHINHGEGIEDLRLDAQRQKQQATDKMDYEDGCKEKVGDGKMLFGYDSENYETDNPSTK
EDTAERQYEDGNLSELPQKKTMSNAGEEKRTKTKLKPNEKDRRIFVAAKGFHFEIHFKFI
NEPHILLAQIAQEAAQKVYIQSSGNVNHCQQITCKENQVIYYGRNPKDREEISAKEREKI
PALQTAGVDFFTFWKLQDALDVRYIYSNDIHAMLNTYGIEAARETIIREVMNVFKSYGIS
VNIRHLSLIADFMTHTGKFRSMNRLGGISDSISPLSRMCFETATKFIREAAYHGEMDDLE
TPSSRICLGLPVKVGTGSFDLMQKVEV
NT seq 5304 nt   +upstreamnt  +downstreamnt
atggctcatagcgaggttgcgacggagtcggtagaggcggttcagtttgggtttatgaca
gacgaagacgttcgtaagcatagttttgtaaaggttacgagcccaattttgttgaacgat
gtggagcgacccatacctggtggactctatgatccagcgatgggtcctttacatgacgac
gcatattgcatttcttgtggccaacgctcatatttctgccctggacattgtggtcatatt
gatcttgtttcacctgtctataatcccttgttatttgataacctttatgaccttctacaa
agaacttgtttttcctgctatcattttcgggcaggtcgaaaacaggttgagaagtgtatt
tctcaattggaactcatcatgagaggtgatgttgttggggcaaaagagctagattctgac
tcacctagtcaattctcatatgcaaaggatgatgatggaaggatgtgccacagtgccgag
tctaagcagcaagtgtggacctctctccattttactgaagtaatgtctgttttgaaaaaa
attctgaaaccaaattctgcaaaaagagattctgtgaaacagaatcctttcaaacagaag
aataaactgaagaccacgaaatgcatgaattgcagtgctaaaaatcctaagattagcaga
cctactttcggatggttacataagagtatgtcaggtgcccacattagagcaaatgttatt
agtgggtccaacatagaagggccttttgctgatggacatcaagaggcatcggtgtctgac
gaagaaattattaatgattcacctccctgggataatgatgttgacaaagataattcagat
gcatttagagctctctctcctggaagtcaatcttctgtgaagaaaaatcataaaacaaaa
ggcagcaaagtgcctaataagtattttaagcaaaaaaaatcctctacaggacctttgttg
ccatcagaggtcaaagaaattttgaggcttctgtgggaaaatgaggctcaactttgctcg
cttatttgtaatatccggcatcagggatttgggaagaaagcaagttatacaatgtttttc
ttggagaatgttcttgtacctccaatcaaatttcgtccaccagccaagggtggtgattct
gtgatggagcatcctcaaactgttttattaactaaggtattgcagtcaaatattgatctt
ggaaatgctcatataaacaactcaggatatgcaaagatagtaagccggtggatggctctc
caacagtctatcaatgtgatgtttaatagcaaaagtgctgcaggtcgaaaagagatggct
acagggatatgtcagttgctggagaagaaggagggactgtttcgccagaagatgatggga
aagagagttaattatgcatgtcgatctgtcatatcaccggatccctatttggctgtcaat
gaaattggaattcctccatactttgcattaagattaacatatcctgagagggtgactcca
tggaatgttgggaagttgagggatgctatcattaatggttctgaaatccatcctggagcc
acacactatgttgataagttatctactgttagattattagctcggaaatcacgcatttca
gtgtcaagaaaattaccctcttctagagggggtttagtgcaacatgggaagttttgtgat
tatgaatctgaaggaaaatttgtgtaccgccacttgcaagatggagatattgtgcttgtc
aaccgacaacctacacttcacaaacccagtataatggcacatgtagttcgcgtgttgaag
ggagagaaaacaattcgcatgcattatgcaaattgcagtacatataatgctgattttgac
ggtgatgaaatgaatgtacattttccgcaagatgaaatttctcgtgcagaagcatacaac
atagtaaatgcaaataatcaatatgtcaagcctaccagtggtgaacccattagagcctta
attcaggatcacattgtcagtgctgtccttctttcaaaaaaggatacctttttaggatgg
gaggagtttaatcaacttctttatagttctggtgtttctgccattggatcaaagtctctc
tccaggaaatttgggcataaagttttcatgtcaagttccgaagatgaggtcttccccctt
ctgcctgcaattatgaaacctgagcctctttggacagggaagcaggttattactgcattg
ttaaatcatatcacaaagggttttcttccattttctgttgaaaaagatacaaaagttcct
cgagactttttcaatgataaaacagaggataataaatcaaatggagaaaatgaagctggt
aatgctagatcaaagaaagtgaacaagcgaagagcacaaaaggaagctgataaggataga
atgaagatgaagggggagccagatgaggacaagttatttatatataaaaataatttggtt
cgtggtgtgattgacaaggctcagtttggtgaatatggtttggtccacactgttcaggag
ctctatggctcaaatacagcagggaatttgctctctgcactgagtcgtttatttactgtt
tatttgcagatgcatggattcacatgtggagtcgatgatcttttactggtggaagtgaaa
gacagagaaaggaagaaactgcttgataaatgtgatgagattggtgaagaagttcattgt
cagtttgttaagctgaaaactaatgaaaaattagatcccatgatcctgcagtttaatatt
gaaaaaactattcgcagtaatggagaagctgccttggcatccctggatcgaaaaatgatt
agtcaactaaatgatagaacaagcaagtctgaggaactcaaaggattgttgtctaaaggg
ctatataagccccctgctaaaaattgtatctctcttatgactacatctggagctaaaggt
ggtgcagtcaatttccaacaaatatcttcacatttgggccagcaagagctagaaggaaag
cgagtcccacggatggtttctggcaaaacattgccctgctttcctccatgggattggact
tctcgatcaggaggccttgtaattgatcgctttctttctggtcttcatccccaggagtat
tatttccattgcatggctggccgtgaagggttggttgatacagctgtcaaaacgtctcga
agtggatatctacaaagatgcctaataaaaaatcttgaatgccttaaagtttgctacgat
tacactgttcgtgattctgatggttccatcattcagttttgttatggagaagatggtgtg
gatgtccatcagacaagctttatagcaaacatcgaagcatttgctgctaataaggaaacg
atctacaagaaatgtcatcatcaaattgataaatccaatgcttacattaagaatttgcct
cctgctcttattaagaagacagagaaattcgtgcagaaattgtccatgaagcaagatcat
gacttattgaatcgagaggggttgttaagattaatggagcataaatatctctctagtctt
gcccagccaggagagccagtcggtgttcttgctgctcagtctgtaggagagccatctaca
cagatgacgttaaatacttttcatctagctggtagaggtgagatgaatgtgacccttgga
attccacgcctccaagagatcttgatgactgcttctgagaaaattaaaactccatttatg
acatgtccattgcatgaggggatatcagaggaagatgccaagcgtcttgcggataaattg
aagaaaataactgtggcagacataatagatagaatgaaagtcagtgtcaagccatttgcc
cttcatcatgataaggtttgccgtatttataagcttgaaatgaagcttcacaaacctgag
cattatccaaaatatgctgatggttcatcagaagattgggaggaaacacttagtactgta
tttgttaggcagttggaggatgacatagaaaaacatgtaaaattgctctccaaaattaaa
ggcattaaagatttcatggctgacccaaagtccaaggattcaaatgaaatggaggaagat
ttttctaaaaatgaatctcatcatgaggaagatggtgatgatgatggtgaacatggtgaa
gggactgacgaggatcttggtttagatgcacaaaaacgaaagcagcaagctacagacgaa
gtggactatgaagatgatgctaacagggagatagatgaagggaacatgtcagctggatct
gacagtgaaaatgatgagtcagtgaatgatgagactgataatctgggtgctaaagaggaa
agacatcatattaaccatggtgaagggattgaggatcttcgtctagatgcacaaaggcaa
aagcagcaagctacagacaagatggactatgaagatggttgtaaagagaaggtgggtgat
gggaaaatgttgtttggatatgacagtgaaaattatgagactgataatccgagcactaaa
gaggatacagctgaaaggcaatatgaagatggtaatctctctgaattaccccaaaagaag
accatgtcaaatgctggagaagagaagaggaccaaaactaaactaaagccaaacgagaaa
gaccgaagaatttttgtggcagctaaggggtttcactttgagatccatttcaaatttatt
aatgaaccacatattttactggctcagattgctcaggaggcagcccagaaggtttacatc
caaagctctgggaacgttaatcactgtcaacaaattacttgcaaggaaaatcaagttatt
tactatggaagaaatccaaaagatagggaggaaatatcagccaaagaaagagaaaagatt
ccagcattacagaccgcgggagtagatttctttacattttggaaattgcaagatgctctt
gacgtaaggtatatatattctaatgacatccatgctatgctgaatacttatggaatagag
gctgccagagaaaccatcattagagaggttatgaatgttttcaagtcctatggtatatct
gtcaacatacgccacctatcccttattgccgactttatgactcatactggtaagtttcgt
tcaatgaacagacttggaggcataagcgattctatttctcctttaagtagaatgtgtttt
gagacagctactaaattcattagggaagcagcatatcatggtgagatggatgatttggaa
accccatcttctaggatatgtcttggattgccagttaaagtgggtactggttcatttgat
ttgatgcagaaagtggaagtttga

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