KEGG   Ziziphus jujuba (Chinese jujube): 107412932
Entry
107412932         CDS       T04794                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107412932
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:zju01009]
    107412932
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zju03400]
    107412932
Enzymes [BR:zju01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     107412932
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     107412932
Protein phosphatases and associated proteins [BR:zju01009]
 HAD phosphatases
  Other HAD phosphatases
   107412932
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     107412932
SSDB
Motif
Pfam: PNK3P zf-PARP Med27
Other DBs
NCBI-GeneID: 107412932
NCBI-ProteinID: XP_048326220
LinkDB
Position
8:complement(join(6149038..6149139,6149570..6149639,6149828..6149955,6150252..6150368,6150463..6150604,6151072..6151148,6151419..6151475,6151637..6151705,6152049..6152117,6152793..6152852,6153071..6153448))
AA seq 422 aa
MLTIFNFGTTFCNPILSPPSIPLLPKIPKSITLFSNRFACFCFQKPPMPRFSSSSTTKIV
AEYAKSNRSTCKKCSKAIDSKALRLGLVSRDARGFDMTKWYHLACFSFGSESVASAETIK
GLESLKSDDQEALKKLLATTSDTTQEVHEQDEDKDEENELEERASKKAKISKSNGEKLLI
AFSVSDIKDTYKDATLSPKWKAFQTTIFLERDDGLHDSSKIAAFDFDGCLAKTSVKRVGP
DAWSLMYPSIPDKLQSLYNDGYKLVSFIHISCLKFLVGSLMIVAVIFTNESNIERWKNKR
QIAVDSKIGRLNSFIEKVKVPIQVFIACGVDKSGGQAEDQFRKPKPGMWYLMEQHFNSGI
PIDKKQSFYVGDAAGRKNDHSDADIKFAEICILFLWVAGYWSKVPCPGGIFQNMMNHALF
GS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgctaaccatcttcaatttcggtacaaccttctgtaatcctatattatctccaccctca
attcccctccttcccaaaatccccaaatccataaccctattctccaatcgtttcgcttgt
ttctgctttcaaaaaccaccaatgcctcgcttctcttcttcttctactaccaaaatcgtt
gccgagtacgcgaagtcgaaccgttcgacttgcaagaagtgctccaaggcaattgattca
aaggctctgaggttgggtctcgtcagtagagacgctcgggggttcgatatgacgaaatgg
tatcacttggcttgcttttctttcggctcggagtcggttgcttcggccgagaccatcaaa
gggctcgagtctttgaagagtgatgatcaggaagctttgaagaaattgttggctactaca
agtgatacaactcaggaggtccatgaacaagatgaagataaagatgaggaaaatgaactg
gaggaaagagcttcaaagaaggcaaagatatctaaatctaatggagaaaagctgcttatt
gccttttcagtttctgatatcaaggacacgtataaggatgcaacactttcaccaaaatgg
aaggcattccaaactacaatatttcttgaacgggatgatggtcttcatgattcaagtaaa
attgctgcttttgattttgatggatgccttgcaaaaacttcggtgaaaagagtaggtcct
gatgcttggtccctgatgtatccttcaatacctgataagctacagagcctgtacaatgat
ggctataagctggtttctttcattcatataagctgtctcaaatttttggttggaagtcta
atgattgtggcagtaatctttaccaatgaatccaacattgagcgctggaagaataagaga
caaatagctgttgactcaaaaattgggcgcctcaacagtttcatcgagaaagtaaaggtc
ccaattcaggttttcattgcttgtggggtggataaatctggcggtcaagcagaagaccaa
tttcgcaaaccaaaaccagggatgtggtatcttatggaacaacacttcaactctggcatt
cccattgataagaagcaatcattttatgtcggagatgctgctggaagaaagaatgatcac
agtgatgctgatattaagtttgcagagatatgtattctttttttgtgggttgcaggctat
tggtctaaagttccatgtcccggaggaatatttcaaaatatgatgaaccatgctttgttt
ggctcttag

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