KEGG   Ziziphus jujuba (Chinese jujube): 107414426
Entry
107414426         CDS       T04794                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A isoform X1
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03020  RNA polymerase
zju03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107414426
  09124 Replication and repair
   03420 Nucleotide excision repair
    107414426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107414426
   03400 DNA repair and recombination proteins [BR:zju03400]
    107414426
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     107414426
  RNA polymerase III system
   RNA polymerase III
     107414426
  RNA polymerase I system
   RNA polymerase I
     107414426
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107414426
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 107414426
NCBI-ProteinID: XP_015878022
UniProt: A0A6P3ZRH7
LinkDB
Position
8:complement(join(25326178..25326247,25326383..25326450,25327424..25327475,25327583..25327755,25327875..25327908,25328464..25328498))
AA seq 143 aa
MADDDYNEMDMGYEDEPPEPEVEEGVEEDVENDNNDETPGDAVETEDKEEQEPVEKPRKT
SKFMTKYERARILGTRAVQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGGD
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcggacgacgattacaatgagatggatatgggatacgaggatgagccaccagaacct
gaggttgaagaaggtgtagaggaagatgtggaaaacgataacaatgatgagactcctgga
gatgccgttgaaacggaggataaagaagaacaggaaccagttgaaaaacctcgtaaaact
tccaaatttatgaccaaatatgagcgagccagaatcttaggtacacgtgctgtgcagatc
agcatgaatgcacctgtaatggttgagttggagggtgagactgacccacttgaaattgct
atgaaggaactgcgtgagcgaaagattccctttaccatacgccgctacctgcctgacgga
agttacgaggactggggagtcgatgaattgattgtggaagactcatggaagaggcaagtt
ggcggtgattag

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