KEGG   Ziziphus jujuba (Chinese jujube): 107431838
Entry
107431838         CDS       T04794                                 
Name
(RefSeq) DNA mismatch repair protein MSH7
  KO
K08737  DNA mismatch repair protein MSH6
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    107431838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zju03400]
    107431838
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     107431838
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II AAA_29
Other DBs
NCBI-GeneID: 107431838
NCBI-ProteinID: XP_015898331
UniProt: A0A6P4BGZ3
LinkDB
Position
11:complement(join(6652374..6652847,6653539..6653666,6654219..6654315,6654448..6654861,6654954..6655148,6655459..6655736,6655852..6655978,6656067..6656260,6656381..6656428,6656556..6656589,6656688..6656813,6657103..6657198,6657598..6657664,6658201..6658256,6658362..6658457,6658712..6659255,6659818..6660119))
AA seq 1091 aa
MQRQKSILSFFQKPSQENQNSGTRRVPQFPVTQRNVSGSDQPKATDPVVEIRGTDTPPEK
VPRQIFPASFVANDDSSGSSLFSSIMHKFVKADDRERASDRNQSNCGSSELHVVSEKINE
PEGSPKIGVAAQQGGEDNIVKSTGKVYQSCVLNIESDDNIPGPETPGMQPLVPRLKRIQE
GGPKSEDNCDRALLGSSKRMKMFEDSMLLNKNDKDVSDTASKFDWLDPSQIRDANKRRPD
DPLYDKTTLYVPPNAFTKMSASQKQYWSTKCQYMDVLLFFKVGKFYELYELDAEIGHKEL
DWKITLSGVGKCRQVGISESGIDDAVQKLVARGYKVGRIEQLETSDKAKARGANSVISRK
LVEVVSPSTATDYHIGPDAVHLLAIKEVGMDNGQTVYGFAFVDCAALKFWVGSINDDASC
AALGALLLQVSPKELIYESRGLSKEVQKALRKYSLTGPSALQLTPMQPIFADASEVRNLV
HSKGYFKGSLNLQNHALKSVIHPDVTLSALGGLINHLSRLMLDDVLRNGDLLPYQVYRGC
LKMDGQTLVNLEIFSNNADGGPAGTLYKYLDNCVTSSGKRLLRTWICHPLMDVEGINNRL
NVVEDMLAHPEIMLLVGQYLRKIPDLERLLGRIRASFQSSAALLLPLLGKKVLKQRVKAF
GTLVKGLRVGMDLLLLLQTEEHLSTPLLKVFKLPLFSGSDGLDKFLTQFEAAIDSDFPNY
KNHDVTDKDAEIISILIELFIEKATEWSEIIHAINCVDVLRSFTVTASSSCGAAMSRPFI
LPLLKNVVLSQETRGPILKAKGLWHPFALGENGMPVPNDIILGEDTSGYHPRTLLLTGPN
MGGKSTLLRTACLAVILAQLGCYVPCEMCVISLVDTIFTRLGATDRIMAGESTFFVECTE
TASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEF
ASHPHVNLQHMACTFRSKSECSSESKELVFLYRLASGACPESYGLQVAVMAGIPEQVIRT
ASKAGQVIRKSIGESFRVSERRSEFSTLHEEWLTNLMAVSRIEDGKFDEDDVLDTLFCLW
HELKNSYRLGN
NT seq 3276 nt   +upstreamnt  +downstreamnt
atgcagcgccaaaaatccatcctctccttctttcagaaaccctcgcaggagaaccaaaac
tccggcacccggcgagttcctcagtttccggtcacacaacggaacgtttccggttcggat
cagcctaaggcaacagacccggttgtggaaatcagaggaaccgacactccaccggagaag
gttccacgtcagatttttccggcgagcttcgtagccaatgacgacagcagtggctcttcg
ttgttctcgagcatcatgcataaatttgtgaaggccgatgatagagaaagggcttctgac
aggaaccagtcaaattgtggttcatctgaacttcatgtggtatctgagaaaattaatgag
cctgaaggatcacctaaaataggagttgctgctcaacaagggggagaggacaatattgtc
aaatccactggaaaagtttatcaaagttgtgtcttaaatattgaaagtgatgataatatt
ccgggaccagaaacaccgggaatgcaacctcttgtgcctcgtttgaaacggattcaagag
ggtggtccaaagtctgaggataattgtgatagagcattgctgggttctagcaaaagaatg
aaaatgtttgaggattcaatgctcttgaacaagaatgacaaggatgtatctgatacagcc
agtaagtttgactggcttgatccatctcaaatcagggatgctaataagagaaggcctgat
gatccactctatgacaagacaacactttatgtaccgcctaatgcttttacgaaaatgtcg
gcatcccagaaacaatattggagtaccaaatgtcaatatatggatgttctgcttttcttt
aaagtgggaaagttctatgagctttatgaattagatgctgaaataggccataaggaactt
gattggaaaataacattaagtggggtaggaaaatgtcgacaggttggtatttctgaaagt
gggattgatgatgctgttcaaaagctggttgcacgtggatataaagttggccgaatagag
cagttggaaacatctgataaagccaaagctagaggtgcaaattctgtaatttcaagaaaa
ctcgttgaagtagtatcaccatcaactgcaactgattaccatataggacctgatgctgtt
catcttcttgcaataaaagaggttgggatggataatggacaaactgtatatgggtttgcg
tttgttgattgtgctgctttgaagttttgggttggctccatcaatgatgatgcttcatgt
gctgctttgggagctttattgctacaagtgtcacctaaagaactcatatatgaaagtaga
ggattgtccaaagaagttcagaaggcactgagaaagtactcattaacaggaccgtcagca
ctgcaattgactccaatgcagccaatttttgcagatgcttctgaagttagaaatttggtt
cattcgaagggatacttcaaagggtctttgaatttgcagaatcatgcgcttaaaagtgtg
attcatcctgatgtcaccttatcagctcttggtggacttattaatcatctttccaggttg
atgttagatgatgttttacgaaatggagatctattaccataccaagtatataggggttgc
ctcaaaatggatgggcaaacactggtgaatcttgagattttcagtaataatgcagatggt
ggtccagcaggtacattatataaatatcttgataactgtgtgacatcatctggtaagcgg
ctattaaggacatggatctgccatccgttgatggatgttgaaggcattaataataggctt
aacgttgttgaagatatgttggctcatccagaaattatgttacttgttggtcaatatctt
cgcaagattccagacttagaaaggttgcttggacgaattagggctagttttcagtcatca
gctgctttattactgcccttgttaggcaaaaaagtactgaaacagagagtgaaagcattt
ggaactctagtaaaaggcctccgggttggaatggatttgttactgctactacagactgaa
gaacacttatctacacctttattaaaagtatttaaacttccattgttcagtggaagtgat
gggcttgataaatttctcactcaatttgaagctgctatagatagtgacttcccaaactac
aagaatcatgatgtaacagataaggatgctgaaataatctcaattctgattgagctcttc
attgagaaagcaactgaatggtccgaaattattcatgccatcaactgtgttgatgtacta
agatctttcacagttaccgcaagttcttcatgtggtgctgctatgtccagacctttcatt
ttgcccctattgaaaaatgtggttttgagtcaagaaacaagaggtcccatattaaaagct
aaagggctgtggcatccatttgccctcggtgagaatggaatgcctgtaccaaatgatata
atccttggtgaggatacaagtggttatcatccacgcactttactgttgactggaccaaat
atgggtggtaaatcaacacttctgcgtactgcttgtcttgctgttatactggcccagcta
ggttgttatgtgccttgtgaaatgtgtgttatctcacttgtggataccatcttcacccga
cttggtgccaccgatagaatcatggcaggcgagagtaccttttttgttgagtgcacggaa
acagcatctgttcttcagaatgccactcaagattctttggttatacttgatgaattgggt
cgaggaacaagcacttttgatggttatgctattgcatatgctgtatttcgtcatctgatt
gaaaaggttaactgccgcttactctttgcaacgcactaccatcctctcacgaaggaattt
gcttctcatccacatgttaatctacaacatatggcctgcacttttaggtcaaaatccgaa
tgctcttctgaaagcaaggagttggtgtttctgtatcgtcttgcatctggagcatgtcca
gagagctatggattgcaagtggcagtcatggctggaatcccagagcaggtgattagaact
gcttctaaggccggccaagttatcagaaagtcaattggagaaagttttagggtgagtgaa
cggagatcagagttctcaactctccacgaggaatggttgacgaacctgatggctgtctct
cggattgaagatggtaaatttgatgaagatgatgttttagacacattgttttgcttgtgg
cacgagttgaagaactcgtatagattgggcaactaa

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