KEGG   Ziziphus jujuba (Chinese jujube): 107432337
Entry
107432337         CDS       T04794                                 
Name
(RefSeq) DNA polymerase delta small subunit isoform X1
  KO
K02328  DNA polymerase delta subunit 2
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03030  DNA replication
zju03410  Base excision repair
zju03420  Nucleotide excision repair
zju03430  Mismatch repair
zju03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107432337
   03410 Base excision repair
    107432337
   03420 Nucleotide excision repair
    107432337
   03430 Mismatch repair
    107432337
   03440 Homologous recombination
    107432337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zju03032]
    107432337
   03400 DNA repair and recombination proteins [BR:zju03400]
    107432337
DNA replication proteins [BR:zju03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    107432337
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      107432337
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     107432337
SSDB
Motif
Pfam: DNA_pol_E_B DNA_pol_D_N
Other DBs
NCBI-GeneID: 107432337
NCBI-ProteinID: XP_015898943
UniProt: A0A6P4ALX8
LinkDB
Position
11:complement(join(10709225..10709281,10709729..10709796,10709928..10710029,10710303..10710430,10710504..10710595,10710669..10710740,10710827..10710895,10711234..10711317,10711404..10711519,10711773..10711880,10712125..10712251,10712347..10712453,10713135..10713261,10713577..10713642))
AA seq 440 aa
MDAMEIDSEKCFQRKQSTYKSLDETFEIKEKYGGQQYSHIYFARLHMMRTIIYSLVPNWK
PHIPVCKILGMEKGKECIIVGTLYKHMKLKPCILDEYSKERSVTPLVKPHNFIHSDDYLI
LEDESGRVHLGGSVLSPSIYVSGVVFALHGKETDAGDFLVLDFLEAGLPPQIEKPLKSRE
DKYVVLLSGLNIGSSSSNPLLFQLLVDHITGHLGDEKEQEIAAQIVHVVIAGNSVEIPRG
LLNGQNLTAKDQSKLSEPIKELDIFLTQIAAGLPVDIMPGPNDPANFCLPQQPLNRFLFP
GSSVYNTFRSCPNPHCFELDDIRFLGTSGQNIDDLEKYSEAPDKIDFVERTLKWRHLAPT
APNTLGCYPFTDRDPFLIESCPHVYFVGNQATYDSRLLKGSEGQAVRLICIPKFSETGIA
VVLNMRNLECHALSFDTQFM
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggacgccatggaaatcgattcggagaaatgcttccagagaaagcagtccacctacaag
tcgctggatgaaacttttgaaattaaggagaagtatgggggtcagcaatacagccatatc
tactttgctcgtctccacatgatgaggactataatctattccctcgttcctaattggaaa
ccccatataccagtatgcaaaattttgggaatggaaaaaggcaaagaatgcatcattgtt
ggaaccctgtacaagcatatgaaactcaaaccttgtattcttgatgaatactctaaggag
agatctgtcacaccacttgtcaagccacataattttatacactcggatgactacctcatt
ttggaagatgaaagtggaagagttcatcttggtggcagtgtgctttctccttctatttat
gtgtcaggggttgtgtttgctttgcatggaaaggagacagatgctggtgacttcttagtt
ctagattttctagaagctggcctaccaccccagattgaaaagccccttaaatcaagagaa
gacaagtatgtagttcttctttcagggttaaacattgggagcagctcttctaatcctctc
ctgtttcagcttcttgttgatcacataactggacacttgggagatgaaaaggaacaagag
attgcagctcaaatagttcacgttgtaattgctggaaattctgttgaaattcctcgtgga
cttctaaatggacagaatctgactgcaaaggatcaatcaaagctttctgagcctattaaa
gagctggatatatttttaactcagattgcagcaggtttacctgtggatatcatgccaggt
cctaatgaccctgcaaatttttgcttaccacagcagcctttgaacagatttcttttccca
ggttcatcagtttacaacacatttagatcttgtcctaacccccattgctttgagcttgat
gatatcagatttcttggaacatcaggtcagaatatagatgatcttgagaagtactcagag
gcacctgataagattgattttgtagagaggacattaaagtggagacatctggcgcccaca
gcgcctaatactcttgggtgttatcctttcaccgatagggaccctttcctgattgagagt
tgtcctcatgtttactttgtcggtaatcaggccacatacgatagtcgccttttaaaggga
tcggaagggcaggcagtgagactcatttgcattcctaaattcagcgagactggaattgcc
gttgtgctaaacatgagaaatcttgaatgtcatgctctcagtttcgatactcagttcatg
taa

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