| Entry |
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| Name |
(RefSeq) uncharacterized protein LOC125423073 isoform X1
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| KO |
| K15865 | threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5] |
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| Organism |
zju Ziziphus jujuba (Chinese jujube)
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| Brite |
KEGG Orthology (KO) [BR:zju00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:zju03016]
125423073
Enzymes [BR:zju01000]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
125423073
Transfer RNA biogenesis [BR:zju03016]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
125423073
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:complement(join(28228225..28228767,28229483..28229643,28230701..28230793,28231517..28231625,28231796..28232004,28232464..28232539,28232612..28232731,28232919..28233168,28234155..28234246,28235089..28235127,28235220..28235387))
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| AA seq |
619 aa
MEDIEDLLVGSNGGAPPGFRLPVTSVGLKPKKNKSKPVVLNDFDNNNLSSKIPGTQTIYI
KTFGCSHNQSDSEYMAGQLSTFGYSLSDNPEEADLWLINTCTVKSPSQSAMDTLISKCKI
ARKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRRTLPALD
LPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVRTVIADGVKEIWL
SSEDTGAYGRDIGVNLPTLLNAIVAELPSDKSTMLRIGMTNPPYILEHLKEIADVLCHPC
VYSFLHVPVQSGSDRVLSAMNREYSVGEFRTVVDTLTELVPGMQIATDIICGFPGETDED
FAETVNLIKDYKFPQVHISQFYPRPGTPAARMKKVPSTVVKKRSRELTSVFEAFTPYNGM
EGRVERIWITEIATDRVHLVGHTKGYVQVLVVAPESMLGTSAMVRITSVGRWSVFGEVLE
TIQLTHNHTAQSKGMSTENECSPCTNTCGGCVSSEEPEYCACGPESCGQTTPEENVVSLN
RPEDRNSRNLIGWLLRKRKNHVQKKEIENASKSTNKQELTKGSVDRWGIVDRVLLGGVLM
SFLTIIALLVHLGFRTATN |
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| NT seq |
1860 nt +upstreamnt +downstreamnt
atggaggacatagaggatttgttggttggaagtaatggtggagctcctcctggttttcgc
ttgccagtcacttcagttggactgaagccgaagaagaacaagagcaaacctgttgttctc
aatgattttgacaataataacctctcctccaaaattcctggcactcagacgatttatatc
aagacttttggatgctcacacaatcagagtgatagtgaatacatggctggtcagctttca
acatttggttattcattaagtgacaatcctgaggaagcagatctgtggctcataaacacc
tgtacggttaaatcaccaagtcagtctgcaatggacactttaatatcaaaatgcaaaatt
gcaagaaagccactggtggtggctggttgtgtgcctcaaggaagtcgagatctgaaagaa
ctagaaggggtcagtatagttggagtccagcaaattgaccgtgtggttgaagttgttgaa
gagactctaaaaggtcatgaagttcgccttttgaaccgcaggacattacctgcacttgac
ctcccaaaggtgagaaagaacaagtttgttgagattcttccaatcaatgttggttgtcta
ggtgcctgcacttattgcaaaactaagcatgctcgtgggcacttagggagttatactatt
gatagccttgtagggcgtgtaagaactgtcatagctgatggggtaaaggaaatatggctg
agtagtgaagatactggagcatatggccgtgacattggggtcaaccttcctacattgttg
aatgccattgttgcagaacttccctctgataaaagcacaatgcttcgtatagggatgaca
aatcctccctatattctagagcacttgaaagagattgcagatgtgttgtgccacccatgt
gtatactcgtttttgcatgtacctgtacagtctgggagtgacagggtcttgagtgcaatg
aatcgagaatattctgttggcgagttcaggacagttgtagataccttgactgagcttgtt
ccagggatgcagattgcaaccgatataatatgtggatttcctggtgaaacagatgaagat
tttgctgaaactgttaacctcattaaggattacaagttccctcaagttcatatatcacaa
ttctatcctcgaccagggacacctgctgcaagaatgaaaaaagttcctagtactgtggtg
aagaaacgtagccgtgagctgacttctgtttttgaagcattcacaccttataatggaatg
gagggcagagtggaaagaatttggataactgaaattgccactgaccgtgttcacttggtt
ggccataccaagggatatgtgcaggtgctcgtggttgcaccagagagtatgttgggaact
tcagctatggtgagaataacatctgtgggaaggtggtcagtctttggagaagtgttagag
actatccagctcacacataaccacactgctcaaagcaagggaatgtcaactgagaacgag
tgcagtccctgcacaaacacttgtgggggttgtgtctcttcagaagagccagaatattgt
gcttgtggacctgaaagctgtggacaaaccactccggaagaaaatgttgtatcattgaat
cggccagaagatcgtaacagcagaaatttgattggatggttgcttaggaagcgaaagaac
catgtgcagaaaaaggaaattgaaaatgcatccaaatccacgaacaagcaagagttgacc
aaaggaagcgtggatagatggggaattgttgatagggttctcctgggtggagtgcttatg
agcttcctgacaattatagctctattagtgcatcttggctttaggactgcaactaattga |
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