Zobellia laminariae: Q5W13_02665
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Entry
Q5W13_02665 CDS
T09239
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
zla
Zobellia laminariae
Brite
KEGG Orthology (KO) [BR:
zla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zla03009
]
Q5W13_02665 (rimO)
Enzymes [BR:
zla01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Q5W13_02665 (rimO)
Ribosome biogenesis [BR:
zla03009
]
Prokaryotic type
ribosomal protein modification factors
Q5W13_02665 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WKX77067
LinkDB
All DBs
Position
complement(524854..526155)
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AA seq
433 aa
AA seq
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MRTKTKKQNKINVVTLGCSKNVYDSEILMGQLRANDKEVVHEEEGNVVVINTCGFIANAK
EESVNTILEYVQKKEAGIVDKVFVTGCLSERYKPDLQKEIPNVDEYFGTSELPNLLKALG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPIMRGKHRSTPIEDLVTESEKLA
AKGVKELILIAQDLTYYGLDIYKKRNLAELLQALVKVEGIEWIRLHYAFPTGFPLDVLDV
MKQEPKICNYLDIPLQHISDSILKSMRRGTTQAKTTKLLKEFRAAVPEMTIRTTLIVGYP
GETEEDFQTLKSWVAEMRFERLGCFTYSHEENTHAYSLEDDVPEDVKQERANEIMELQSQ
ISWELNQNKIGETFRCIIDRKEGTHFVGRTEFDSPDVDNEVLIDATKFYLKQGEFVNIKI
TEAADFDLYGEPA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagaacgaaaacgaagaagcagaataaaataaatgtagtcactttgggatgctcgaaa
aacgtgtatgattccgaaatactcatggggcagttgcgtgccaacgacaaagaggtagtg
catgaagaggagggaaatgtagtggtaatcaatacctgcggatttatagcgaatgcaaaa
gaagaaagtgttaatactattttagagtacgttcagaaaaaagaggccggtatagtagat
aaggtatttgtaaccggttgtcttagtgagcgatataagcccgatttacaaaaagaaatc
ccgaatgtagacgaatatttcggtaccagtgaacttcctaatttattgaaggctcttggt
gcggattataagcatgaactaattggtgagcgtttaacgaccacgccaaaaaattatgcc
tatttaaagattgcagaaggttgcgatagaccttgttcattctgtgctattcctattatg
aggggtaagcaccgtagtacacctattgaagatttagttactgagtctgaaaaattagcg
gcaaaaggggtaaaagaacttattcttattgctcaggatttgacgtattacggtcttgat
atttataaaaagagaaacttagccgagctgttacaagctttggtaaaggtagaaggtatt
gaatggatcaggttgcattatgcttttccaacaggttttcctttggatgtgcttgatgtt
atgaagcaagagcctaaaatctgtaattacttagatattccattacaacatatttcagat
tccatactaaaaagtatgcgtcgtgggactacacaggctaaaacaacaaaattgttgaaa
gagtttagagctgcggttcctgaaatgactattcgtactacgttgatagttggttatcct
ggagaaacggaagaagattttcagactttaaaaagttgggtagccgagatgcgttttgag
cgcttaggttgttttacatatagtcatgaagaaaatacacatgcctattctctggaagat
gatgttcctgaagatgttaagcaggaaagggctaatgagatcatggagttacaatctcag
atttcatgggagttgaaccaaaataaaattggagagactttccgttgtatcatagaccgt
aaagaaggaactcattttgttggtcgtacggaatttgattctcccgatgtggataacgaa
gttttgatagatgctactaagttctatttaaaacaaggtgaattcgtaaatataaagatt
acagaagctgccgattttgatttatacggcgagcctgcatag
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