Zonotrichia leucophrys gambelii (white-crowned sparrow): 135442443
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Entry
135442443 CDS
T09958
Symbol
GRIN2B
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04020
Calcium signaling pathway
zle04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
135442443 (GRIN2B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135442443 (GRIN2B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zle04040
]
135442443 (GRIN2B)
Ion channels [BR:
zle04040
]
Ligand-gated channels
Glutamate (ionotropic)
135442443 (GRIN2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
135442443
NCBI-ProteinID:
XP_064558304
LinkDB
All DBs
Position
1A:complement(36440705..36664693)
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AA seq
1503 aa
AA seq
DB search
MRPRAECYSPRFWLVLAVLATTGSGAHAQKSHPSIGIAVILVGTSDEVAIKDAHEKDDFH
HLSVVPRVELVAMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFISAQTL
TPILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQ
DFVNKIRSTIEHSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPVILLYCTKEEATYI
FEVANSVGLTGYGYTWIVPSLVAGDTDTVPSEFPTGLISVSYDEWDYGLPARVRDGIAII
TTAASDMLSEHSFIPEPKSSCYNTQEKRIYQSNMLNRYLINVTFEGRNLSFSEDGYQMHP
KLVIILLTKERKWERVGKWKEKKLQMKYYVWPRFELYPDSEEREDDHLSIVTLEEAPFVI
VENVDPLSGTCMRNTVPCQKRIVTENKTDEEPDYMKKCCKGFCIDILKKISKSVKFTYDL
YLVTNGKHGKKINGTWNGMIGEVVTKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMV
SRSNGTVSPSAFLEPFSADVWVMMFVMLLIISAVAVFVFEYFSPVGYNRCLADGREPGGP
SFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE
YVDQVSGLSDKKFQKPNDFSPPFRFGTVPNGSTERNIRNNYPEMHSYMVKFNQRGVDDAL
FSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVDL
AILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFIC
EHLFYWQFRHCFMGVCSGKPGVVFSISRGIYSCIHGVAIEERQSAMNSPTATMNNTHSNI
LRLLRTAKNMANLSGVNGSPQSALDFIRRESSVYDISEHRRSFTHSDCKSYNNPPCEENL
FSDYISEVERTFGNLQLKDSNVYQDHYHHHHRPHSIGSTSSIDGLYDCDNPPFNAQSRSI
GKKPLDLGLPPAKHSQLGDLYGKFSFKSDRYGGSGTHDDLIRSDVSDISTHTVTYGNIEG
NAAKRRKQQYKDSLKKRPASAKSRREFDEIELAYRRRPPRSPDHKRYFRDKEGLRDFYLD
QFRTKENSPHWEHVDLTDIYKERGDDFKRDTGGGGGGSCTNRAHHKHGSGEFGGSNEHKH
SVVSGVPAPWEKNLTNLDWEDRSGANFCRSCPSKLHNYTPSTVGQNSTRQACIRCEACKK
AGNLYDISEDNSLQELDQPPAPVPVATSATSSSKYPQSPSNSASKVQKKNRNKLRRQHSY
DTFVDLQKDDSALAPRSVSLKDKGRFLEGSPYAHMFEMPASETTFANNKSSVPATSYHHH
NNPGSSGGYMLSKSLYPDRVTQNPFIPTFGDDQCLLHGSKSYFFRQPVVAGGPKARPDFR
AIVTTNKPVVSALHGAVPARFQKDICIGNQSNPCVPNNKNPRAFNGSSNGHVYEKLSSIE
SDV
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccagggcggagtgctactctccaaggttttggctggtgctggcagtcctcgca
acaacagggagcggggcccatgcccagaaaagccacccgagcattggcattgcagtcatc
ctggtggggacctcagacgaagtggccatcaaagatgcccacgagaaagatgacttccac
cacctctcagtggtgcctcgggtggagctggtggccatgaatgagacagatcccaagagc
atcatcacccgcatctgtgacctcatgtctgaccgcaagatccaaggggtggtattcgct
gatgacacagaccaggaagccattgcccagatcctggacttcatctctgcccagaccctc
actcccatcctgggcatccatggaggctcctctatgatcatggcagataaggatgagtca
tccatgttcttccagtttggcccatcaatagaacagcaagcttctgtcatgctcaacatc
atggaagaatacgactggtacatcttctccattgtcactacgtacttccctggttaccag
gactttgtgaacaagatccgcagtaccattgagcacagctttgtgggctgggaactggag
gaggtccttctgttggacatgtccctggacgatggggactcaaagatccagaaccagctc
aagaagctccaaagccctgttatcctcctctactgcacaaaggaagaggccacctacatt
tttgaggtggccaactcagtgggtctgacaggctatggttacacgtggatcgtgcccagc
ctggtggcaggggatacagacacagtgccatccgagttccccaccgggctcatctctgtc
tcatatgatgaatgggactacggtcttcctgccagagtaagggatggaatagccataatc
accacggctgcttctgatatgctgtctgaacacagcttcatccctgagcccaagagcagc
tgttacaacacccaggagaaaaggatttaccagtccaacatgctcaacaggtacctgatc
aatgtcacctttgaaggcaggaatttgtcgttcagtgaggatggataccagatgcatccc
aagctggtcatcatccttttgaccaaggagaggaagtgggagagggtggggaaatggaag
gaaaaaaagttgcagatgaagtattacgtgtggccgcgctttgagctgtatcccgactct
gaggaacgtgaggacgatcacctgagtatcgtgaccttggaagaggcaccatttgtcatt
gtggagaacgtggatcccctaagtggcacctgcatgaggaacacggtcccttgccaaaaa
cgcatcgtgactgagaacaaaactgatgaggagccggattacatgaagaaatgttgcaag
gggttctgcatagacatcctcaagaaaatctcaaagtctgtcaagttcacctatgacctc
tacttggtgactaatggcaagcatggaaaaaagatcaatgggacatggaatggaatgatt
ggagaggttgtcaccaaacgggcctatatggctgtgggatccctcaccattaatgaggaa
cgttcagaagtggtggacttctctgtgcccttcattgagacgggaatcagtgtcatggtg
tcacgtagcaatggaactgtctcaccttctgccttcttagaacctttcagtgctgacgta
tgggtgatgatgtttgtgatgctgcttatcatctctgcggtggctgtcttcgtctttgag
tacttcagccctgtgggctacaatcggtgccttgctgatggcagagagccaggaggtccc
tctttcaccattggcaaagctatctggctgctgtgggggctggtgttcaacaactctgtg
ccagtacagaatcccaagggtaccactagcaagatcatggtgtcggtgtgggccttcttc
gctgtcatctttctggccagctacactgccaacctggctgccttcatgatccaagaggaa
tacgtggaccaggtgtctggcttgagcgacaaaaagttccagaaaccaaatgacttctcg
ccccctttccgctttgggacggttcccaacggcagcacggaaaggaacatccgcaacaac
taccctgaaatgcacagctacatggtgaagttcaatcagaggggtgtggatgatgctttg
ttctcgctgaagactgggaagttggatgctttcatttatgatgcagcagtgctaaactac
atggctggcagagatgaaggctgcaagctggtgacaattgggagtgggaaagtgtttgcc
tccactggctatggcattgccatccagaaggactcaggctggaagcgccaggttgatctt
gcgattctacagctttttggagatggggagatggaggagctggaagctctctggctcact
ggcatttgtcacaatgagaagaatgaggttatgagcagccagctggatatagataacatg
gcaggtgtcttctacatgttgggagcagccatggccctcagtctcatcaccttcatctgt
gagcatctcttctactggcaattccgccactgcttcatgggtgtctgctctggcaagcct
ggtgtggtcttctccatcagcaggggtatctacagctgcatccatggcgtggccattgaa
gaacgccagtcagcgatgaactcccccacagcaactatgaacaacacccattccaacatc
ctccgcctgcttcggacagccaagaacatggccaacctgtcaggggtcaacggctcacca
cagagtgccctggactttatccgccgcgagtcatccgtctacgacatctctgagcaccgc
cgcagcttcacccactcagactgcaaatcctacaacaaccccccctgcgaggagaacctc
tttagtgactacattagtgaggtggaaaggacctttggcaatctccagctgaaggacagc
aatgtgtatcaggaccactaccaccaccaccaccgcccccatagcattggcagcaccagc
tccatcgacgggctctatgactgtgacaacccgcccttcaacgcccagtcgcgctccatt
gggaagaagcccctggacctgggcttaccccctgccaagcacagccagctgggtgacctt
tatggcaagttctccttcaagagtgaccgctacgggggcagtgggacccacgacgacctg
atccgctcggacgtctctgacatttccactcacacggtcacctatggcaacattgagggc
aatgcagccaagaggcggaagcagcagtacaaggacagcctgaagaagcgcccagcctcc
gccaagtcccggagggaatttgatgagatagagctggcctaccgccggcgcccgccccgc
tcacctgaccacaagcgctacttcagggacaaggaagggctacgggacttctaccttgac
cagtttcggaccaaggagaactcaccgcactgggagcacgtggacctgacggatatctac
aaagaacggggagatgactttaagcgtgacacgggaggaggagggggtggatcctgcact
aacagggcccatcacaagcacggctcaggcgagtttggtggaagcaatgagcacaagcat
agcgttgtgagcggggtcccagcgccgtgggagaagaacctgaccaatctagactgggaa
gaccggagcggggctaatttctgccgcagttgcccttctaaactgcacaactacacgcca
tcaacggtggggcagaactccacccgccaggcctgcatccgctgtgaggcttgcaagaaa
gcgggcaacctgtacgacatcagtgaggacaactccctccaagagctggaccagccgcct
gcccctgtgcccgtggccaccagtgccacctcctcctccaaatatcctcagagcccttcc
aattctgcctctaaggtgcagaagaagaaccgcaacaaactccgccggcagcactcctac
gacacctttgtggacctgcagaaggatgactcggccctggccccccgcagcgtcagcctc
aaggacaagggccgctttttggaggggagcccctacgcccacatgtttgagatgccagcc
agtgagaccacctttgccaacaacaagtcctcagtgcccgccaccagctaccaccaccac
aacaaccccggcagcagtgggggctacatgctcagcaagtcgctctaccccgaccgggtc
acccaaaaccctttcatccccacttttggggatgaccaatgcttgctccacggcagcaaa
tcttatttcttcaggcagcctgtggtggcaggagggcccaaagccaggccagacttccga
gccattgtcaccaccaacaagccggtggtctcagcccttcatggggctgtgccagcccgt
ttccagaaggacatctgtatagggaaccagtccaacccctgtgtgcctaacaacaaaaac
cccagggctttcaatggctccagcaacgggcatgtttatgagaaactctccagtattgag
tctgacgtttga
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integrated database retrieval system
