Zonotrichia leucophrys gambelii (white-crowned sparrow): 135443690
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Entry
135443690 CDS
T09958
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zle03016
]
135443690 (TRDMT1)
Enzymes [BR:
zle01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
135443690 (TRDMT1)
Transfer RNA biogenesis [BR:
zle03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
135443690 (TRDMT1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
135443690
NCBI-ProteinID:
XP_064560268
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Position
2:21433392..21475142
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AA seq
399 aa
AA seq
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MAALRVLELYSGIGGMHQALRESCTYAEVVAAVDVNTLANDVYKHNFPSTPLWAKTIEGI
TLKEFDRLSFDMILMSPPCQPFTRIGLQGDVSDPRTKSFLYILDILPRLQKLPKYLLLEN
VKGFESSSARNELLQTLTTCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLHQEPLSFQAPG
QILTRFPDQDPEDLLKEKVADKVDEASSLSSEEKNLDPNIGPDCSSKKSLPKGAFLFKLE
TVEEMERKHNQDNDPSIQMLKDFLEEENEEMSQYFLPPKSLLRYALLLDIVKPTCRRSTC
FTKGYGHYVEGTGSVLQTAVDVQLESVFKHIDELPEEEKLMKLSSLKLRYFTPREIANLH
GFPLEFGFPEKVTVKQRYRLLGNSLNVHVVAKLISILLE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgcgggtgctggagctgtacagcggcatcgggggcatgcaccaggccctc
agagaaagctgcacatatgcagaagttgtagctgctgttgatgtgaacactcttgccaat
gatgtttataagcacaactttcccagcaccccgttatgggcaaagactattgagggcata
acactgaaagaatttgacagattatcttttgatatgattttgatgagtcctccctgtcag
ccttttacaagaattggcctgcaaggtgacgtgtctgatccacggaccaagagctttctc
tatatccttgatattctcccaaggcttcagaagcttccaaaatacctacttttagaaaat
gttaaaggatttgaatcttcttctgcaagaaatgaacttttgcaaacactaacaacatgt
ggatttaaatatcaggaatttctcttgtctccaacatgtcttggcattcccaattctagg
ctgcggtattttctaattgcaaagctgcaccaagaaccattgtcctttcaagctcctggt
caaatattgacaagattcccagatcaggatccagaagatttgctcaaggaaaaagttgct
gacaaagtggatgaagccagttctttgtcctctgaggagaagaatctggatccaaacatt
ggtccagattgcagcagcaagaagagtttaccaaaaggggcctttctgtttaagcttgaa
acagtagaagagatggaaaggaaacataatcaggataatgatccctctattcaaatgcta
aaagacttcttggaagaggaaaacgaagaaatgagtcaatatttcttaccaccaaagtcc
ttactgcgctatgctctcttgttagacattgttaaacccacctgccggagatccacgtgc
tttacaaaagggtatggacactatgtagaggggactggctctgttctacagacagcagta
gacgtacagcttgaatcagtgtttaaacacattgatgagttaccagaagaagagaagctt
atgaaattgtcatcattaaaactgaggtactttaccccaagagaaatagcaaatcttcat
ggattccctttggaatttggttttcctgaaaaggtgacagtaaagcaacgctatcgtctg
ctgggaaacagcctcaatgtacacgtggtggcaaaattgatctccattctacttgaataa
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