Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446101
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Entry
135446101 CDS
T09958
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135446101 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135446101 (POLR1B)
Enzymes [BR:
zle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135446101 (POLR1B)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
135446101 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
zf-piccolo
Motif
Other DBs
NCBI-GeneID:
135446101
NCBI-ProteinID:
XP_064565675
LinkDB
All DBs
Position
3:complement(100618965..100632850)
Genome browser
AA seq
1123 aa
AA seq
DB search
MAGTGTGPRPDPHRLRPPRRGTTQRDLTSAHIESFNYAVSEGVYRAVQDVPSVEFALKET
RLALTLVGVSIAPPAVPAGTVCQERRVFPAECRGLRSTYRGRITADISWSVNDMPQGTIR
QPLGYIPIMVKSKLCNLCGFSPQDLLQHHEEEEEMGGYFIINGLEKVIRMLIMPRRNFPL
AMARHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMLNFIFRKELFFLPLGF
ALKALVNFPDYQIFEELVKGREDDTFFANCVTEMLRAVVDAGCLTQQNVLDYLGKSFRVK
LNLPEWYSNEQAADFILSNCICIHLTNRTEKFYLLCMMTQKLYAFAKGECMEDNPDSLMN
HEVLTPGQLFLMFLKERLETWLQSVRFVLEKRAEKTDISLNTDSLVKAFGLAPDFTKPFE
YLLATGNLRSKTGLGMLQASGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTTTVRKLLP
ESWGFLCPVDTPDGEPCGLMNHMTALCEIVTEMVPVTDIPPLLCSLGVTPIDAAPCQPYS
ECYRVVLDGSMVGWVEQELAPEIAQTLRRFKITQEKRFPARAEVVLIPMTGKPSLYPGLF
IFTNPCRMVRPVRNLAYGKNEWIGTLEQIFMNVATLQSEVVPGVTTHQELFPHSILSVVA
NLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRPSMYDYYG
MDSYPVGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKAESIDLSLKASRAGDN
LVFGIRPGDPNIGEKLDADGLPFVGSILQPGDPFYSFMNLNTGETFTVYYKSKEVGIVDN
VRLCSNDRGTGKFKKACITVRVPRNPTIGDKFASRHGQKGILSQLWPVEDMPFTENGMVP
DILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKKSALKYFGETLASAGY
NYFGTEKMYSGISGVELEADIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQPVKGRNV
EGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSVAYVCTSCGSMTSPVLEKLSQASVTS
SRRYSCSVCGEVDAIEVVPVPHVFRYFVAELAAMNIKTKLNVE
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaccgggacggggccgcgcccggacccgcaccggctgcggccgccgcggcgc
ggcaccacccagcgcgacctcaccagcgcccacatcgagtccttcaactacgccgtcagc
gagggcgtctatcgcgccgtgcaggatgtgccctcggtggagttcgctctgaaggagacc
cggctggcgctgacgctggtcggcgtgtccatcgcccctcccgccgtgccggccgggacg
gtgtgccaggagaggagggtgttcccggctgagtgccgcgggctccgcagcacctaccgc
ggcaggatcaccgccgacatcagctggtcagtgaatgacatgccccaagggactatcaga
cagcccttggggtacattccaatcatggtcaagtccaaattgtgcaacctctgtggtttt
tctccacaagaccttctgcagcaccatgaggaggaagaggaaatgggaggctactttata
atcaatggcttagaaaaagtgatcaggatgctgattatgcccaggcgaaacttccctctt
gcaatggcaaggcacaagtggaaaaacagaggccctggtttcacagagtatggggtggtg
atgcactgtgtcaaggatgagcataccgcaataaatatgaaccttcactacttggaaaat
ggctgtgtcatgttgaatttcatttttcgcaaagagttgttcttcctccccttgggattt
gctctgaaggcattggttaatttcccagactaccagatttttgaagagttggtgaaagga
agggaagatgataccttttttgcaaactgtgtcactgagatgttgagagcagtggtggat
gctggctgtttgacacagcaaaacgtcctggactacctgggaaagagcttcagagtgaaa
ctcaacctgcctgagtggtacagcaatgaacaggctgcagatttcattctgagcaattgt
atctgtattcacctgaccaatagaactgaaaagttctacctgctctgtatgatgacccag
aagctctatgcttttgccaaaggggaatgcatggaagataatccagacagtcttatgaat
cacgaggtgcttaccccaggacagcttttccttatgttcttaaaggagaggcttgaaacc
tggctgcaatctgttaggtttgttttggagaaaagagcagaaaagacagatatcagccta
aatacagacagcctggtgaaggcatttggcctggcaccagacttcaccaagccatttgag
tatctccttgcaactggtaacctgaggtcaaaaacagggctgggcatgctgcaggccagt
ggtctctgtgtggtgggggacaagctgaatttcatccgctacctctcccacttccgctgc
atccacagaggggcggcgttctcccagatgagaaccacgaccgtgcgcaagctgctgccc
gagtcctggggcttcctgtgccccgtggacaccccagatggagagccctgtgggctcatg
aaccacatgacagctctgtgtgaaattgtcactgagatggtgcccgtgacagacatcccg
cctttgttatgttccctgggtgtcacccccattgatgcagctccatgccagccttactca
gagtgctacagggttgtgctggatggctccatggtgggctgggtggagcaggagctggct
cctgagattgcacaaactctccgccgtttcaagatcacacaagagaagaggtttcctgca
cgggcagaagtggtccttatcccaatgacaggaaaacccagcctgtatcctgggctcttc
attttcaccaacccttgccggatggtgcggcctgtcagaaacctggcctatggaaagaat
gaatggattgggactctggaacagatcttcatgaacgtggccacgctgcagtcagaggtg
gtgcctggagtgaccactcaccaggaactcttccctcacagcattttgagtgtggtggcc
aatctcattcccttctctgaccacaaccaaagtccacggaacatgtaccagtgccagatg
ggaaagcaaaccatgggctttcctgtttacaactacaaggatcgctcggataacaagctg
taccacctgcacaccccccagagccctctggtgaggcccagcatgtatgactattatggc
atggacagctatcccgttggcaccaattccatcgtggctgtcatctcctacagtggctat
gacatggaagatgcaatgatcgtaaataaatcttcctggcagagaggatttgcttatgga
agtgttatcaaggcagagagcattgacctttcccttaaagccagcagggcaggagataat
ttagtatttggcatcaggcctggcgatccaaacattggggagaagctggatgctgatgga
ttgccttttgtggggtctatcctgcagcctggggaccccttctacagcttcatgaacctc
aacacaggggagaccttcactgtgtactacaagagtaaggaagtgggcattgtggacaac
gtgaggttgtgcagcaacgaccgtggcactgggaagttcaagaaggcctgcatcactgtg
agggttccccgaaatcccaccattggggacaaatttgccagccggcatggacagaagggc
atcctgagccagctgtggcctgttgaggacatgcccttcacagagaacggcatggttcca
gacatcctcttcaaccctcacggctttccctcccgcatgaccattggcatgttaattgag
agcatggcagggaagtcagcagccctgcacggcgtgtcctacgatgccactcccttcacc
ttcaccgagaagaaatctgctctgaagtactttggtgagactctggccagcgcgggttac
aactactttggcacggagaagatgtacagcggcatcagcggggtggagctggaggcagac
atcttcgtgggcgtggtgtactaccagcgcctgcgccacatggtctccgacaagttccag
gtgaggaccacggggccccgagacgccgtcaccaaccagcccgtcaagggcaggaacgtg
gaaggtgggatccgcttcggcgagatggagcgcgacgctctgctggcccacggcacctcc
ttcctgctgcaggaccgcctcttcaactgctccgacggctccgtggcctacgtgtgcacc
agctgcggcagcatgacgtcccctgtgctggagaaactgtcccaggcctctgtgaccagc
agcaggaggtactcctgctccgtctgcggcgaggtggatgccatcgaggttgtccctgtg
ccccacgtcttccgctacttcgtggctgagctggcggccatgaacatcaaaacaaagctc
aatgtggagtag
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integrated database retrieval system
