Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450002
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Entry
135450002 CDS
T09958
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03020
RNA polymerase
zle04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135450002 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
135450002 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135450002 (POLR3A)
Enzymes [BR:
zle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135450002 (POLR3A)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
135450002 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
135450002
NCBI-ProteinID:
XP_064573631
LinkDB
All DBs
Position
6:complement(22908675..22941788)
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHSPLQYGVLDHRM
GTSEKDRPCETCGKSLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCRIMLSVE
EKKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKNTCPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPVVSTFLQSFETAIEYNKEVEPLLGRAQENLNPLVVLNLFKRIPVEDIPLLLM
NPQAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVCNGPDVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKVKVRLPPPAILKPVTLWTGKQV
FSLILKPSDDCPVKANLRTKGKQYCGKGEDLCYNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCRSEPALSKNELVLTSESIMKKNEFLC
CQDSFLQEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICVSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQSLKEELPKVV
VQGIPEVSRAVIHVDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTSSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKESTPPRRPLIFD
HNEFHIPIVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagggagaccgatgtggccaagaaaataagccacatctgtttt
ggcatgaaatctccagaagagatgcgtcagcaagctcacattcaagtggtcagcaagaat
ttgtatagtcaggacaaccatcactctccgctgcagtatggagtgctggaccatcgcatg
ggaaccagtgaaaaagaccggccctgtgaaacctgtgggaaaagtctggctgactgctta
gggcattatgggtacattgacttagaactaccatgctttcacgttgggtacttcaaagct
gtgataggcatcttacagatgatctgcaaaacctgttgccgcatcatgctgtcagtggaa
gaaaaaaagcagtttttagattacctaaaacgacctggccttacatatcttcagaagaga
gggctgaaaaagaaagtgtctgagaagtgccgaaagaaaaacacttgtccttactgtggg
gcctttaatggaactgtgaagaagtgtggtttgttgaagataatacatgaaaagtacaag
acaaataagaaagttgtagatccagtagtatctacttttctccagtcctttgaaactgcc
attgaatataacaaagaagtggagcccttactgggaagagctcaggaaaacttgaatcct
ttggtagtattgaacctgtttaaaagaatcccagtggaagacatccctctacttctaatg
aacccacaagcaggtaaaccttcagatctgatcctcacacggctcctggtgcctccactg
tgtatcagaccctctgtggtgagcgatttgaagtctggcaccaatgaggacgatttgaca
atgaagctgacagagatcattttcctcaatgatgtgataaaaaagcatagaatatcaggc
gccaaaacacagatgattatggaagactgggattttcttcaactgcagtgtgccctgtac
attaatagtgagctctctggcatacccctcaacatggcacctaaaaaatggaccagaggt
tttgttcagaggcttaagggaaagcaaggtcggtttagaggcaatctgtctggaaagaga
gtggatttttctggcagaacagtcatttcacctgatcctaacttgagaatagatgaagta
gcagtgcctattcatgttgctaaaatattgacctttcctgaaaaggtaaacaaagcaaat
attaattttatgaggaaacttgtctgcaatggtcctgatgttcatcctggagcaaacttc
atacagcaaaggcacactcagatgaaaaggtttttgaagtacgggaacagagagaagatg
gcgcaggagctgaagttcggtgacattgtggagcgccatctgatcgatggtgacattgtc
ctgttcaacaggcagccctctctgcacaagctgagcatcatggcccacattgctagagta
aaacctcataggacattcaggttcaatgagtgtgtctgtacaccatacaatgcagacttt
gatggagatgagatgaaccttcaccttcctcagacagaagaagcaaaagcagaagcactt
gttttaatggggactaaagcaaacttggtaacacctagaaatggagagcctcttattgct
gctattcaagatttcctcacaggtgcttaccttcttacattaaaagataccttttttgat
cgagccaaagcctgtcaaattattgcatctatcctggttggcaaggatgaaaaggtcaaa
gttcgccttccacccccagcaattctgaagcctgtaacactctggacaggaaaacaggtt
ttcagcctcatcctcaaacccagcgatgattgtcctgtaaaagccaacctacgaaccaag
ggcaaacagtattgtggcaaaggggaggacctgtgctacaatgattcttatgtcacaatt
caaaacagtgagttaatgagtggcagtatggacaaaggaaccctggggtcaggatccaag
aacaacatcttctacatcttgctgagagactggggccaggtggaagctgcagatgccatg
tcacgtctggccagacttgctccagtctatctttctaatcgtggcttttcaattggaatt
ggtgatgtaacccctgggcagggcctgctaaaagctaagtatgagctcctgaatgctggc
tataagaaatgtgatgagtatattgaagctctgaacactggcaagctacagcagcagcct
ggttgtactgcagaagagacactagaggctttaatcctgaaagaactgtctgttatcaga
gatcatgctggcagtgcctgtctcagagaactggacaagagcaacagtcccctgatcatg
gctctctgtggttctaaaggctccttcattaatatatctcagatgattgcttgcgtaggg
cagcaggctatcagtgggtcccgtgttcctgatgggtttgagaatagatccttgcctcac
tttgagaagcattctaagctccctgcagcaaaaggctttgttgccaacagcttctattct
ggcttgactcccacagaattctttttccacacaatggctggtcgagaaggtctggttgat
acagctgtaaaaacagctgaaactgggtatatgcagagacgtctggtaaaatcccttgaa
gatctttgctcacaatatgatttaacagtcagaagttctactggtgacattatacagttt
atttatggaggggatggcttggatcctgcagctatggaagggaaggatgaaccactggaa
ttcaagagagttctagacaatatcagggctgtctatccatgccgaagtgagccagccctt
agcaaaaatgaattggtgttaacatctgagtccatcatgaagaagaatgaatttctttgc
tgccaagacagttttctgcaggaaattaaaaaattcatcaaaggtgtttctgagaagata
aaaaaaactagggacaagtatggaattaatgacaatggcacaacagagccaagagtttta
tatcagttggataggattactccaacacaactagagaagtttttagagacttgtagagac
aaatacatgagggcacagatggagcctggttctgcagtaggagctctttgtgcacagagc
attggtgagcctggcacacagatgactctgaagactttccattttgctggtgttgcttca
atgaacattactttgggtgtgccaagaatcaaagaaattattaatgcttcaaaggctatt
agcacccctattataacagcacagttggacaaagatgatgatcctgattttgcccgtctg
gttaaaggaagaattgagaaaactttgttaggggagatttctgaatatattgaggaagtg
tttcttccagatgactgtttcatcctagtgaagctgtctttagagcgcatcagattgctg
agattagaggtgaatgccgagaccgtgcgctactcgatttgcgtctccaagctcagagtg
aagcctggggatgttgctgtgcatggagaagcagttgtgtgtgtgacccctcgtgaaaat
agcaagagttccatgtattatgtgttgcagtccctcaaggaagagctaccaaaggttgta
gtgcaaggcataccagaggtttcccgagctgtcattcatgttgatgaacaaagtggaaag
gaaaaatacaagcttctggttgaaggtgataatctacgagctgttatggctactcatgga
gtgaaaggaacaaaaacatcctctaacaacacttatgaggtagagaaaactctgggaatt
gaagctgctcggacaaccattatcaatgagattcaatacacgatggtgaaccatggcatg
agcattgacaggagacatgtcatgttattgtctgatctaatgacttacaagggtgaagtt
ctgggcattaccaggtttggactggcaaaaatgaaggaaagtgtgttgatgctggcttct
tttgaaaagactgcagaccatctttttgatgctgcctactttggacagaaggattctgtt
tgtggtgtttctgagtgcatcatcatgggaattccaatgaatattgggacaggtctcttt
aagctgttacacaaagcagacaaagaatcaacccctcccaggaggcctctgatatttgat
cataatgaatttcatattcccattgttacatag
DBGET
integrated database retrieval system
