Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450819
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Entry
135450819 CDS
T09958
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135450819 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135450819 (TPR)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135450819 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
135450819
NCBI-ProteinID:
XP_064575408
LinkDB
All DBs
Position
8:6551632..6585019
Genome browser
AA seq
2374 aa
AA seq
DB search
MAAVLQQLLERAELAKLPRAVQGKLERFLGDQQGEIDGLRARHERFKVDSEQQYFEVEKR
LAQSQERLVNETQECQTLREELKKLHEQLKVLNEKNKELEAAQDRNAAVQSQLMREKEEL
EAEKRDLVRTTERRSQEVEHLNEDVKRLNEKLTEANTEKAKLQLKLDELQTSDVSMKYRE
KRLEQEKELLQNQNTWLNAELKAKTDELLHTAREKGNEILELKCSLENKKEEVSRMEEQV
NSLKQSNENLQKHVEELLNKLKEAKEQQTSMEERFHNELNAHMKLSNLYKSAADDSEAKS
NELTGAVEELHKLLKEAGEANKAAQEHLAEVEESKATMEKELREKISKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLHMEKLENRRIN
KYLDEIVQEVEAKAPILKRQREEFERSQKAVASLSAKLEQAMKEIHRLQDSADQANKHAS
FFERESQRLEVRVKDLSQQICVLLMELEEARGNHVIRDEAVSSADISSSSEVITQHLVSY
RNIQELQQQNQRLLVALRELGEAREKEEQETTSSKISELQSQLDEALSELQQLRESRQHQ
LQLVESIIRQRDMFRILLTQTTGAIIPLQASGMLPEEICLTSTPKRPNLPQSMATPAPVS
MTESVETVEAKAALKQLQEVFENYKKEKAENDKLLNEQNEKLQEQVTDLRSQNAKISTQL
EFASKRYEMLQDNVEGYRREITSLHERTQKLTATTQKQEQIINTMTQDLRGANEKLAVAE
VRAENLKKEKDILKMSDVRLTQQRDSLLVEQRGQNLLLTNLRTIQGILERSETETKQRLN
NQIEKLEREISQLKKKLESEVEQRHSLTKNQEVHILDLKRQLETETNRHINTKELLKNAQ
KENAMLKQQLNNTEAQLTSQSSQRSPGKGQPSTTKDVDDLVSHLRQAEEQVNDLRERLKT
SSSNVEQYRAMVLSLEESLNKEKQVTEEVRTTVEARLKESSEYQAQLEKKLMESEKEKQE
LQEEKRKAVENMEQQLSELKKSLSAVQSEVQEALQRASTALNNEQQARRDCQEQAMMASE
AQNKYERELMLHAADVEALQAIKEQVAKNAAVRQQLEEAAQKAESELLESKASWEERERM
IKDEASKLASRCEDLEKQNRLLHEQLESMSNKMVTSMKEAIPTAANVSLSEEGKSQEQIL
EILRFIRREKEIAETRFEVAQVESLRYRQRVEHLERELQELQDSLNAEREKVQVTAKTIA
QHEELMKKTETMNILIETNKMLREEKERLEQELQQIQAKVRKLEADILPLQESNAELSEK
SGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDLEEYRKLLSEKEANAKRVQQMSEETGR
LKAEVARTNASLTTSQNLVQSLKDEVTKIRTEKDILQKELDAKVADIQEKVKTITQVKKI
GRRYKTQYEELKAQHDKMVAESSTLPLAEPQEDQVSAQEVQELKDTLSQAEVKTKNLETQ
VESLQKTITEKETEVRNLQEQIMQLQTELARFHQDLQEKTTQEEQLRQQITEKEEKTRKT
LLAAKQKIAQLAGTKEQLTKENEEWKQKSSSLEEQKTELEVRMSALKSQYEGRICRLERE
LREQQERHHEQRDEPPESTNKVPEQQRQISLKSTPASGERGIASTSDPPTANIKPTPVVS
TPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPVE
HVPVFGSASGSVRSTSPNVQTSLPQPILTVQQQTQATAFVQPTQQSHAQIEPAAQEPAPA
IVEVVQSSQIERPSTSTAVFGTVSATPSSSLSKRSREEEEDNTVENSDQISEETVDAPTS
KKLRIMQRVGPEEEVTAEESTDGEVEAQTYNQDSQDSIGEGVTQGEYAAMEDSEETSQSI
PIDLGSLQSDQQNTSSSQDGQSKRDDVIVIDSDDEDDDDEENEGEQEDYDDEEEEDEDDD
EDTGMGDEGDDSNEGTGSADGNDGYEADDAEGADGTDPGTETEESMGGAESNQRAADSQN
SGEGSTGAAESTFAHESLREQQPSSASSERQGPRPPQSPRRPPHPLPPRLTIHAPPQELG
PPVQRIQMTRRQSVGRGLQLTPGIGGMSLFFQQQHFFDDEDRTVPSTPTLVVPHRTDGFA
EAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRS
VPTTPLQVAAPVTVFTESASADASEHASQSVPMVTTSTGSLSTTTEPGAGDDADEVFAEA
ESEGITSEAGLEIDSQQEEESVQASDESDLPSTSQDPPSSSSADTSSTQPKSLRRVRLQP
PTLRTGVRGRQFNRQRGVTHAMGGRGGLNRGNIS
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgctgcagcagctcctggagcgggccgagctcgccaagctgccccgcgcc
gtgcagggcaagctggagcgcttcctgggcgaccagcagggcgagatcgatgggctgcgg
gcccgccatgagcgcttcaaggtggacagcgagcaacagtactttgaagtggaaaagcga
ctggctcagagccaggaaagacttgtaaatgagactcaggaatgtcaaactctgcgggag
gagctcaaaaagcttcatgagcagctgaaggtgctcaatgagaagaacaaggagctcgag
gctgcccaggaccggaatgcggccgtgcagagccagttaatgcgagagaaggaagaactg
gaagctgagaagagagacttggtccgaaccactgaaaggcgatctcaggaagttgaacat
ttaaatgaggatgttaaacgtttaaatgaaaagctcacagaggccaacacagaaaaggca
aagcttcagctgaaattggatgagcttcaaacatcagatgtttccatgaagtaccgggag
aaaaggctggagcaagagaaggagctgctgcagaaccagaacacatggctgaatgctgag
ctgaaagctaaaacagatgagctgctccatactgccagggagaaaggcaatgaaatcctg
gagctcaaatgcagtctggagaacaaaaaggaggaggtttccagaatggaggagcaggtg
aacagcttgaaacagtccaatgaaaacctccagaagcatgttgaagaacttttaaataaa
ctgaaggaggcaaaagagcagcagacaagcatggaagagagattccacaatgaactgaat
gcccacatgaaattatccaacttgtataagagtgctgctgatgactcagaggcaaagagc
aatgagctgacaggagcagtggaagagctgcacaagctcctgaaggaagcaggggaagct
aataaagcagcccaggaacatttggctgaggtggaggagtcaaaagccaccatggagaag
gagctgagagagaagatcagtaagctggagaaggagctggagaatgccaatgatttactg
tcggctacgaagcgcaaaggagccatcctgtccgaggaggagctggcagccatgtctcct
actgctgcagcagtggccaaagtggtcaagcctggcatgaagttaactgagctgtacaat
gcctatgtagaaactcaggatcagttgcatatggagaagctggagaataggagaatcaat
aaatatttggatgaaatagtgcaggaagtagaagccaaagccccaatcttaaaacgtcag
cgtgaagaatttgagcgttcccaaaaagctgttgcgagtctgtctgcaaagcttgaacaa
gctatgaaggagatccatcgcctgcaggacagcgccgaccaggccaacaaacacgcctcc
ttcttcgagagggagagccagagactggaggtgcgagtgaaggatctctcccagcagatc
tgtgtgctgttaatggaactggaagaagccagaggcaaccacgtgattcgtgatgaagca
gtgagctctgctgacatcagcagctcttctgaagtgatcactcaacacctggtgtcctac
agaaatatccaagagcttcagcagcagaatcagcgtctcctggtggctcttcgggagctg
ggggaggcaagagaaaaagaggagcaagaaacaacatcatctaagatctctgagctgcag
agccagctggatgaggctctcagtgagctgcagcagctgcgggagtcgcggcagcaccag
ctgcagcttgtggagtccatcatccgccagcgggacatgttccgcatcctgctcacccag
accacgggagccatcattcctctgcaagcttcaggtatgttaccagaggagatctgtctt
acatctactccaaagcgcccgaatttacctcagtccatggcaactcctgctccagtgtct
atgaccgagtccgtggagactgtggaggccaaggctgctcttaagcagttacaagaagtt
tttgagaactataaaaaagaaaaggcagagaatgacaagcttctgaatgaacagaatgaa
aagcttcaggagcaggtcacagacttgaggtcacaaaatgccaagatatccacacagctg
gaatttgcctccaaaaggtacgagatgctgcaggataacgtggaaggctatcgccgggaa
atcacctccctgcacgagagaacccagaagctcacagcgaccactcagaagcaggagcag
atcattaacaccatgactcaggacctcaggggagctaatgaaaaactggcagtggcagag
gtgagagcagaaaacttgaaaaaagagaaggatatcctgaagatgtcagatgtgcgcctg
actcagcaacgtgactctctgctggttgaacaaagaggacagaacttgctgctcaccaac
ttgagaacaattcagggaatacttgaaagatctgagacagaaacaaagcagagactcaac
aatcagatagaaaagcttgaacgtgagatatctcagctgaagaagaaactggagagtgag
gtggagcaaagacattccctcaccaagaatcaagaggttcatatcctggacctgaagagg
cagctggagacagagaccaaccgtcacatcaacacaaaggagctcctgaagaatgcccag
aaggaaaatgccatgctgaaacagcagctgaacaacactgaggcccagctcacatcccag
tcctcacaaaggtctccagggaaaggtcagcctagtacaactaaagatgtggatgatctt
gtaagtcatctgagacaagctgaggagcaagtcaatgacctgagagaaaggctcaagact
agttccagtaatgtggagcaatacagggccatggttctcagcctggaggaatccctcaat
aaggaaaaacaagtgacagaggaagttcgtacaacagttgaagctcgtctgaaggaatct
tcagaatatcaggcacagctggaaaagaagttgatggagtcagaaaaagaaaaacaggag
ctgcaggaggagaagcgtaaagcagtggagaacatggagcagcagctttcagaactgaag
aagagtctgtcagctgtgcagtcagaagttcaggaagctcttcagagagccagcacagct
ctgaataatgaacagcaggccaggagggactgccaggagcaagcaatgatggcttctgaa
gctcagaacaaatatgagcgggagttgatgcttcatgctgctgatgtggaggcactacag
gccatcaaagagcaagttgccaagaatgcagcggtgaggcagcagctggaggaggctgct
cagaaagcagagtctgagctcttggaatccaaagcctcctgggaagagagagagagaatg
atcaaggatgaagcttcaaaacttgcatcccgctgtgaggatctggagaaacaaaatcga
ttgttacatgagcagctggagagcatgagcaataagatggtgacttccatgaaagaagcc
atcccaactgcagcaaatgtttctcttagtgaggaaggcaaatcccaggaacaaatctta
gaaattcttaggtttatccgtcgggagaaggagattgcagagacgaggttcgaggtggcg
caggtggagagcctgcggtaccgccagagagtggagcacctggagagggagctccaggag
ctgcaggacagcctcaacgctgagagggagaaggtgcaggtaacagcaaaaaccattgca
cagcatgaagaattaatgaagaaaactgagaccatgaacatactcatagaaaccaacaag
atgttaagggaagagaaggagaggctggagcaagagctacagcagatacaagcaaaggta
cgcaagctcgaggcagacatcctgcccctgcaagagtccaatgctgagctcagtgagaag
agtgggatgctgcaggcagagaaaaagcttttggaagaggatgttaaacgctggaaagcc
cgaactcagcacttactgagccagcagaaggacactgacctcgaagagtatcgaaagctg
ctctctgagaaggaggcaaatgccaagcgtgtccaacagatgagtgaagaaacaggcagg
cttaaagcagaagttgccagaactaatgcatccttgactacaagccagaatcttgttcag
agcctgaaggatgaagtaactaaaataagaacagaaaaggacattttgcaaaaagaactg
gatgctaaagtggctgacatacaggaaaaagtgaaaactataacacaggtcaagaaaatc
ggtcgcaggtacaagacccagtatgaggagctgaaagcacagcatgataagatggttgct
gaatcatcaaccctgcctttggcagaaccacaagaagaccaagtttctgcccaggaagta
caagagctaaaagacactctcagtcaagctgaagtgaaaacaaagaatttggagactcag
gttgaaagtttacaaaagacaataacagaaaaggaaactgaagttagaaatctccaggag
cagataatgcagctacagacagaactggcccgtttccatcaagatctacaagagaagact
acacaggaagaacagctcaggcaacagatcacagagaaggaggagaaaacaaggaagacc
ttgcttgcagccaagcagaaaattgcacagttagctggtacaaaagagcagctcacaaag
gagaatgaggagtggaagcagaagagcagctccctggaggagcagaagacggagctggag
gtgcggatgagtgccctgaagtcccagtacgaggggcggatctgccgcctggagagggag
ctgcgggagcagcaggagcggcaccacgagcagcgggatgagcccccagagtccacaaac
aaggtcccagaacagcagaggcaaatctcactcaagtctactccagcttcaggtgaaaga
ggaattgccagcacttcagatcctccaacagcaaacattaaaccaactcctgttgtgtca
actcccagtaaagtgactgctgcagcaatggctgggaataagtctactccaagggccagc
atccgtcccatggtgactcctgccacggtcaccaatcccaccactacccccacagccaca
gttatgccaacaacacaggtggagactcaggaagccatgcagtcggaaggacccgtggag
cacgtcccggtgttcggcagtgccagcggctccgtgcgctccaccagccccaacgtgcag
acatccctgccccagcccatcctgactgtgcagcagcagacccaggccactgccttcgtg
cagcccacccagcaaagccacgctcagatcgagcctgcagctcaggagccagcccctgcc
atcgtggaggtggtgcagagctcccagatagagaggccttccacctccacagccgtgttt
ggcacagtttcagctacccccagttcctcactgtctaagcgctcccgagaggaagaggag
gacaacactgtggagaactcagaccagatctctgaggaaacagtggatgcacctacttca
aagaaactgagaatcatgcagagagttgggcctgaggaggaagtgacagccgaagagagc
actgatggagaggtggaggcacaaacatacaatcaagactcacaagactccattggagaa
ggtgttacacagggggagtacgcggccatggaggacagcgaggagacttcccagtctatc
cctatagacctggggtcccttcagtcagaccaacaaaacacttcttcatctcaggatggc
cagtccaagagagatgatgtgattgtaattgatagtgatgatgaagatgatgacgatgaa
gaaaatgaaggcgagcaggaagattatgatgatgaggaagaggaggatgaggatgatgat
gaagacacagggatgggagatgaaggtgatgacagcaatgaaggaactggtagtgctgat
ggcaatgatggatatgaagcagatgatgctgagggtgctgatggtacagatcctggaaca
gagactgaagagagcatgggaggagctgaaagcaaccagagggcagcagattcccaaaac
agtggagaggggagcacgggtgctgcagagtccacgtttgcccacgagagcctgcgggag
cagcagccgtcatcggcatcgtccgagcgccagggcccgcggcccccgcagtccccacgg
aggcccccgcaccccctgcccccacggcttaccatccacgcccctccccaggagctgggg
cccccagtgcagagaatccagatgactcgaagacagtcggtggggcgagggcttcagctg
acccctgggataggtggaatgtctctttttttccagcagcagcacttctttgatgatgag
gacagaacagttccaagtacaccaactcttgtagttccacatcgtacagatggatttgca
gaagccattcattccccccaggtagctggagttcctcggttcagatttgggccccctgaa
gatatgccacaaaccagctccagtcactctgatcttgggcagctggcatcacaaggaggt
ttagggatgtatgaaaccccactgttccttgcccacgaggaggaatcagggggtcgtagt
gtccccacaacaccgttacaagtggcagcaccggtgacggtgttcacagagagtgcctcg
gccgacgcctcggagcacgcgtcccagtctgtgcccatggtcaccacctccaccggcagc
ctgtccaccaccaccgagcctggcgctggcgacgacgccgatgaggtcttcgcagaggca
gagtctgagggcattacttcagaagcgggtctagaaatcgatagccagcaagaggaagaa
tctgttcaagcatctgatgagtcagatcttccttcaactagtcaggatcctccttcaagt
tcatctgcagacacgagcagcactcagcccaagtccctgcgccgtgtccggctgcagccc
ccgacgctgaggacgggcgtgcgtggccggcagttcaacaggcagaggggtgtaactcat
gctatgggaggcagaggaggcctgaacagaggaaacattagttaa
DBGET
integrated database retrieval system
