Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453185
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Entry
135453185 CDS
T09958
Name
(RefSeq) laminin subunit beta-2-like isoform X1
KO
K06243
laminin, beta 2
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04510
Focal adhesion
zle04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135453185
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135453185
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Laminin_I
F5_F8_type_C
BRE1
Ferritin
Motif
Other DBs
NCBI-GeneID:
135453185
NCBI-ProteinID:
XP_064580034
LinkDB
All DBs
Position
12:complement(8918334..8932476)
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AA seq
1827 aa
AA seq
DB search
MDLLALAFLLVGGLVAGGCQEPDLSHGCARGSCYPATGNLLVGRASRLSATSTCGLDGPQ
EYCIVSHLQDSEKCFTCDSRDPSLPESHRIENVIYLSSPHDKRTWWQSENGVEHVSIRLD
LEGEFHFTHLIMKFKTFRPAAMLVERSADFGRTWKVYRYFAYNCSKLFPGIPSHSLGLVD
EVLCDQRYSEIEPSSHGEVIFKVLDPSIPVADPYSPDIQDLLRVTNLRVNLTKLHTLGDN
LLDSRQEVLHKYYYAVEELVLRGSCFCHGHAAHCAPAPGAPTPSVPGMIHGRCVCEHHTQ
GLNCERCEDFYHDLPWRPAEGSNTNACRRCDCNEHSRRCHFDMAVFLATGNTSGSVCDDC
QHNTMGRHCHLCKPFYYRHPRSDIRSPTACAPCDCDPAGSLDGGACDGHTDVALGMIAGQ
CRCKENVAGPRCDRCRHGAYGLSHDDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFV
AGRSCSQCVPEFWGLSYDLGGCRPCACDFGGSYNNRCSMEDGACPCRPHIMGRQCDQVQP
GFFCAPLDYYTYEAEQATGHGHSHPQLPGAIRVEVPQDCLEYDTREPAGRKGRSRHQHSP
LRAPQSPVPSRRSRQQPPKPDVEEVVRDSAGRMVTWTGLGFARVRDGAGLTFRVDNVPYA
MDYELLLRYEPESAEDWEAVVSVSSRVLPTSPRCGNLLPSEQMYRQSLPHSQRYVLLSRP
FCFEPSTPYEVTMRLQRAGVTQRHPGAFILIDSLVLLPRVSELPGFHGAEAAARQEELER
YHCLEVFRMAPPHPLAEACARLVCSVSALMHGGALPCQCDPQGSRSSECQVQGGQCECKP
HVIGRRCDRCAPGSFGFGPLGCSPCTCSPEGSVSQLCDKVSGQCQCQPGTVGRQCDQCQP
GHWGFPACRPCQCNGHAEECDPRTGTCLHCRDHTSGRHCERCQDGYYGNPVLGSGQQCRP
CPCPGYPGTRHYHGSACHADDETHHIVCLCAPGYAGPRCDRCSPGYFGAPEMEGGECRPC
QCNNNIDTSDPEGCDPRTGQCLRCLYHTAGPRCAHCQPGYYGNALQRSCRRCGCDPRGTL
ASHCTDGTCDCDRGTGACACRPNVVGKSCDRCAPHFWGLGGPRGCEPCGCHPTHALHPAC
DTVTGQCQCRPGFGGRVCSQCQEHHWGNPEQECRACECEPLGAESPQCEQDNGQCRCRPG
FGGLRCDRCQRGYQEPFPRCSPCHPCFGRWDLAVGSLREGLQHLRAHVQALREGGSALPL
SPRRLRELEEALGHVEQLLEEGHSPGSPLLDGLPRQLGGTRMELDNFGKHLQELEQYLDQ
LAQADMQHHGRLAELSRQLGGLNRTTSHLQSLLGTVAAAGFSESYRSILASAEASRQAEA
LANGTAGELSRAQMTQRATERALQQRGDTFRRGTAAARKSLRETQKRVMGLNIARINEKI
CGAPGDRSCEDASCGGALCRDSEGTRHCGGTGCAGALPVSARALSSAHNASEQLEVALGQ
LGVVAQKMQEVQELARGARSRAEEALGRSQAARSRAEKATAQLRDFIRRIKAFLAEEGAD
PGSIELVARQVLNISLPSSPGQIQELLWEMQESISQLEGVDAVLNSTAEGLAVARDLLAQ
GQEARERAEGIRDELAGTQQALEVARTQAMTAGSTLQSARDAIQVAEKRAREAERRLQAL
DRKESQAQRRLRELAQRIATLQEHGRGARHLAQQAKDGAQRATTTSGTLSQDLAQVTQRY
VMLKNRVGSLDRVSGGALQRVSQLMAEARDLLDKASNSKRKLEDLEQRFGANERMMAAKV
TRLQALEQQVTGLLQEIRERANAYATC
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggacctcttggcgcttgctttcctcctggtcgggggactggtggcagggggttgtcag
gagcctgacctgagccatggctgcgcccgcggcagctgctacccagccactgggaacctg
ctggtggggcgagcctcccgcctgagtgccacctccacctgtgggctggatgggccccag
gagtactgcatcgtcagccacctccaggactcagagaaatgtttcacctgtgactcacgt
gacccgtccctgcctgagagccaccgcatcgagaatgtcatttacctgagcagcccccat
gacaaacggacctggtggcagtcggagaacggtgtggaacatgtcagcatccgcctggac
ctggagggcgagttccacttcacccacctcatcatgaagtttaaaaccttccgccctgcg
gccatgctggtggagcgctcagcagactttgggcgcacctggaaggtgtatcgctacttt
gcctacaactgctccaagctcttccctggaatccccagccactccctggggcttgtagat
gaggtgctgtgtgaccagcgctactctgagatcgagccgtccagccacggggaggtcatc
ttcaaggtgctggacccctccatccccgtagcagatccctacagcccagacatccaggac
ctgctgcgtgtcaccaacctgcgggtgaacctcaccaagctgcacacgttgggggacaac
ctgctggactcacggcaggaggtgctgcacaagtactactatgctgtggaggagctggtg
ctgcgcgggagctgcttctgccatggccacgctgcccactgtgctccagcaccgggtgcc
ccaacaccctctgtccctggcatgatccatgggcgctgtgtctgcgagcaccacacgcag
gggctgaactgcgagcgctgcgaggatttctaccacgacctgccctggcgcccggccgag
ggctccaacaccaacgcctgtcgccgctgtgactgcaacgagcactcaaggcggtgtcac
tttgacatggccgtgttcctggccacggggaacaccagtgggagtgtgtgtgatgactgc
cagcacaacaccatgggccgccactgccacctctgcaagcccttctactaccggcaccct
cgctccgacatccgatcccccactgcctgtgccccgtgtgactgtgacccagcagggtcc
ttggacggaggtgcctgcgatgggcacacggacgtggcactgggcatgattgcggggcag
tgccgctgcaaggagaacgtggccgggccccgctgtgaccgctgccggcacggcgcctat
ggcctcagccacgacgacccacagggctgtcagccatgcaggtgtgacccacggggtacg
gtggcaggcagctccccgtgtgaccccatcagtggggactgctactgcaaacgcttcgtg
gctgggcgctcctgcagccaatgcgtgcccgagttctggggtctgagctatgacctgggg
ggctgccggccctgcgcctgcgacttcgggggatcctacaacaaccggtgctccatggag
gatggggcatgtccctgccgtccccacatcatggggcggcagtgtgaccaggtacaaccc
ggcttcttctgtgccccccttgactactacacctatgaggccgagcaagccaccggccat
ggccacagccaccctcagctcccgggcgccattcgggtggaggtgccccaggactgcctg
gagtacgacaccagggagccggcggggcggaagggacgctcacggcatcagcacagcccc
ctccgtgctccccagtcccccgtcccctcgcgccgcagccgccagcagccccccaagccg
gatgtggaggaggtggtgcgggacagtgccgggcgcatggtgacctggacaggcttgggg
ttcgcccgggtgcgggacggggctggcctgaccttccgcgtggacaacgtgccctacgcc
atggactacgagctgctgctgcgctacgagcccgagtcagccgaggactgggaggccgtg
gtcagtgtcagctcccgggtgctgcccaccagccctcgctgtgggaacctgctgccctcc
gagcagatgtaccgccagagtctgccccacagccagaggtacgtgctgctgtcccggccc
ttctgcttcgagcccagcaccccttatgaggtgaccatgcggcttcagcgggctggtgtc
acccagcgccaccccggtgccttcatccttattgactcgctggtgctcctgccacgggtg
tcagagttgccagggttccatggggcagaggcagcagcgcgccaggaggagctggagcgg
taccattgcctggaggtgtttcgcatggccccccctcaccccctggccgaggcctgtgcc
cgcctggtctgcagcgtctcagccctgatgcacggcggggctctgccctgccagtgcgac
ccacagggctcccgcagcagcgagtgccaggtgcagggcgggcagtgtgagtgcaagccc
cacgtcatcggccgacgctgcgaccgctgtgcccccggcagcttcggctttgggcccctg
ggatgcagcccctgcacctgctccccggagggctcagtgtcccagctgtgtgacaaggtg
agcgggcagtgccagtgccagcctggcaccgtgggccggcagtgtgaccagtgccagccc
ggccactggggcttccctgcctgccggccctgccagtgcaacgggcacgccgaggagtgc
gacccccgcacgggcacctgcctgcactgccgcgaccacaccagcggccggcactgtgag
aggtgccaggatggttactatgggaacccagtgctgggctcggggcagcagtgccggccc
tgcccctgccccggctaccctggcacacggcactaccacgggagtgcctgccatgcggac
gatgagacacaccacatcgtctgcctctgcgcccctggatacgcggggccccgctgcgac
cgctgctcccctgggtactttggggctccggagatggagggcggggagtgccggccctgc
cagtgcaacaacaacatcgacaccagcgacccggagggctgcgacccccgcacgggacag
tgcctgcgctgcctgtaccacacggctgggccccgctgtgcccactgccagccgggctac
tacggcaatgccctgcagcgcagctgccggcgctgtggctgtgacccacggggcacactg
gcctcccactgcaccgatggcacctgtgactgtgaccgtggcacaggagcctgtgcctgc
cggcccaacgtcgtgggcaagagctgtgatcgctgcgcaccccacttctggggcctgggg
gggccaaggggctgtgagccctgtggctgtcaccccacacatgccctgcaccctgcctgt
gacacagtgacagggcagtgccagtgccggcctggcttcgggggtcgtgtctgttcccag
tgccaggagcaccactggggaaatcctgagcaggagtgccgagcctgtgagtgtgagccg
ctgggtgccgagagcccgcagtgcgagcaggacaacgggcagtgccgctgccggccgggc
ttcggggggctgcgctgtgaccgctgccagcggggctaccaggagcccttcccccgctgc
tcgccctgccacccttgctttgggcgctgggacctggccgtgggcagcctgcgggaaggg
ctgcagcacctcagggcacacgtgcaggcactgagggaggggggctctgcactcccactc
agcccccgtcgcctgcgggagctggaggaggctctggggcacgtggaacagctgctggaa
gaggggcacagccctggtagtcccctcctcgatggactgcccaggcagctgggtggcacc
aggatggagctggacaatttcgggaagcacctccaagagttggagcagtatctagaccag
ctggcgcaggcggatatgcagcaccatggccggctagctgagctgagccgccagctgggg
ggtctcaaccgaaccacctcccaccttcagagcctcctcggcactgtagcagcagcggga
ttcagcgagtcctaccgcagcatcctggcatcggcggaggcctcgcggcaggcggaggcg
ctggccaatggcacggctggcgagctcagcagggcacagatgacacagcgggcgaccgag
cgggcgctgcagcagcggggcgataccttccgccgtggcacagctgccgcccgcaaatcc
ttgcgggagacacaaaaacgggtgatgggactcaacattgccaggatcaatgagaagatt
tgcggggcgcccggagaccggagctgcgaggacgcgtcttgtggaggagccttgtgccga
gacagtgaggggacaaggcactgcggtggcactgggtgtgcaggggcactgcctgtctca
gctcgagccctgagcagtgctcataatgcctctgagcagctggaggtggcattagggcag
ctgggtgttgtggcacagaagatgcaggaggtgcaggagctggcacggggggcacgcagc
agggcagaggaggcgctggggcgctctcaggccgcccgcagccgtgcagagaaggcgaca
gcccagctgcgggacttcatccgccgaatcaaggccttcctggcagaggagggagctgac
ccaggcagcatcgagctggtggcccggcaggtgctgaacatctccctgcccagcagccct
ggacagatccaggagctgctgtgggagatgcaggagagcatcagccagctggagggggtg
gatgcggttctcaacagcacagcagaggggctggctgtggcacgggatctgctggcacag
ggacaggaggccagggagcgagcagaaggcataagggatgagctggcggggacacagcag
gcactggaggtggcacggacacaggcgatgacagcagggagcaccctgcagagcgccagg
gatgccatccaggtggctgagaagagagccagggaggcggagcgcaggctgcaggcgctg
gacaggaaggagtctcaggcgcagcggcggctgcgggagctggcacagcgcatcgccacc
ctgcaggagcacggccggggcgctcgccacctggcccagcaagccaaggatggggcacag
cgtgccaccaccacctcagggacgcttagccaggacctggcccaggtaacacagcgttat
gtgatgctgaagaaccgggtgggctcgctggacagggtgtctggtggggccctgcagcgt
gtgtcacagctgatggcagaagcccgagacctcctggataaggccagcaacagcaaaagg
aagctggaagacctggagcagcgctttggggccaatgaacggatgatggcggcaaaggtg
acacggctgcaggctttggagcagcaggtcaccgggctgttgcaggagatccgggagagg
gccaacgcttacgccacctgctag
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