Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457737
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Entry
135457737 CDS
T09958
Symbol
NECTIN4
Name
(RefSeq) nectin-4
KO
K06593
poliovirus receptor-related 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
zle04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
135457737 (NECTIN4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
135457737 (NECTIN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135457737 (NECTIN4)
Cell adhesion molecules [BR:
zle04515
]
Immunoglobulin superfamily
Nectin family
135457737 (NECTIN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
ig
C2-set_2
Ig_2
Sema4F_C
Chordopox_A13L
Protocadherin
EphA2_TM
Adeno_E3_CR2
DUF6377
WSS_VP
Ctr
Orf78
DUF4446
Motif
Other DBs
NCBI-GeneID:
135457737
NCBI-ProteinID:
XP_064588537
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All DBs
Position
25:complement(2606473..2621143)
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AA seq
539 aa
AA seq
DB search
MEPRGMPGAPVLLLGFLLAVTGGGRVEVPRSVTAVLGQDVVLPCRYRAQEQEQVVQVTWL
KRGGAGAVPAEVAVLNPQHGEHVQEPFVGRVLRHGHGDLGDGAIVLRNAVQGDEGDYECH
LITFPMGNFEGRLTLRVLVPPLPILNPGPPLEEGQGRTLAASCTAEGSPVPSVRWETEVR
GTNATRRSAHARSASVTSEFFLVPGRSMNGKSLTCVVAHPGLRHEKRITHTLSVAYLSDA
SVLGHTAEWQEGMEGAALTCLGDGNPPPTYNWTRVDAPLPAGVRVKGDTLLFQRPLAVAD
AGDYVCRVSNRVAAKEARANVSIRGRATEDTVRRVDLVSASVVVVGVIAAVLLCVLVIVV
VVMTLYHKRKTQRISEKYEEELTLTRENSIRRLHSSHSSDPRAQLEETLQLRTESRQGSL
RGDSLRGDSLRGDSLRGDSLRGTSICSAMSEEPEGRSYSTLSTVREIETQTDVPVVVPAV
PAVPPAPGGKEPKEEEEEGGGGGGDPIKAAMTHFVQENGMLQAKPSSNGIYINGRGHLV
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggagccccgcgggatgcccggggcgcccgtgctcctgctcggcttcctgctcgccgtc
accggcggcggtcgcgtggaggtgccgcgcagcgtgacggccgtgctgggccaggacgtg
gtgctgccatgccggtaccgggcgcaggagcaggagcaggtggtgcaggtgacgtggctg
aagcgcggcggcgcgggcgcggtgcccgccgaggtggccgtgctgaacccgcagcacggc
gagcacgtgcaggagcccttcgtgggccgcgtgctgcgccacgggcacggcgacctcggc
gacggcgccatcgtgctgcgcaacgccgtgcagggcgacgagggcgactacgagtgccac
ctgatcaccttccccatgggcaacttcgaggggcgcctcacgctcagggtgctcgtgcca
ccgctgcccatcctgaacccgggcccgccgctggaggagggccagggccggacgctggcg
gcctcgtgcacggccgagggcagcccggtgccgtcggtgcgctgggagaccgaggtgcgc
ggcaccaacgccacgcggcgctcggcccacgcgcgctccgcctccgtcaccagcgagttc
ttcctggtgcccgggcgcagcatgaacggcaagagcctcacctgcgtggtggcacacccc
ggcctgcgccacgagaagaggatcacgcacacgctcagcgtcgcctacctgtcggatgcg
tcggtgctgggccacacggccgagtggcaggaggggatggagggggcggcgctgacctgc
ctgggggacggcaacccccccccgacctacaactggacacgggtggatgcgccgctgccc
gcgggtgtcagggtcaagggggacacgctgctgttccagcggccgctggccgtggccgac
gccggtgactacgtgtgccgagtgtccaaccgggtggccgccaaggaggcccgggccaac
gtcagcatccggggacgcgccacagaggacacggtgcgccgcgtggacctggtgtcggcc
tcggtggtggtggtcggggtcatcgccgccgtcctgctctgcgtcctcgtcatcgtcgtg
gtggtcatgaccctgtaccacaaacgcaaaacacagcgcatctccgagaagtacgaggag
gagctgacgctgacccgggaaaattccatccggaggctccactccagccacagcagcgac
ccccgggcacagctggaggagacgctgcagctgcgcacggagagtcgccagggcagcctg
aggggggacagcctgcgaggggacagcctgaggggggacagcttgagaggggacagcctg
cgtggcaccagcatctgctccgccatgagcgaagagcccgagggccgcagttactccacg
ctctccacggtgcgggagatcgagacgcagaccgacgtccccgtggttgtccccgctgtc
cccgcggtgccaccggcgcccggcgggaaggagcccaaggaggaggaggaggagggtggg
ggcggtgggggggaccccatcaaggcggccatgacgcactttgtgcaggagaacggcatg
ctgcaggccaagcccagctccaacggcatctacatcaacggccgcggccacctggtgtga
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