KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135458866
Entry
135458866         CDS       T09958                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03020  RNA polymerase
zle03420  Nucleotide excision repair
zle04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:zle00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    135458866 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    135458866 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    135458866 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zle03021]
    135458866 (POLR2E)
   03400 DNA repair and recombination proteins [BR:zle03400]
    135458866 (POLR2E)
Transcription machinery [BR:zle03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     135458866 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     135458866 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     135458866 (POLR2E)
DNA repair and recombination proteins [BR:zle03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      135458866 (POLR2E)
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C
Other DBs
NCBI-GeneID: 135458866
NCBI-ProteinID: XP_064590362
LinkDB
Position
28:complement(3605419..3608584)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacgtaccggctgtggaagatccgcaagaccatcatgcagctg
tgccacgaccgcgggtacctggtgacccaggacgagctggatcagaccctagaggagttc
aaggcgcagttcggggacaaacccagcgagggccgcccccgtcgcaccgacctgaccgtg
ctggtggctcacaacgatgatcccacggatcagatgttcgtgttcttccccgaggagccc
aaggtgggcatcaagaccatcaagatgtactgccagcgcatgcaggaggagaacatcacc
cgggcgctgatcgtggtgcagcagggaatgaccccctcggccaagcagtccctggttgac
atggctcccaagtacatcctggagcagttcctgcagcaggagcttctcatcaacatcaca
gagcatgagctggtgccagagcacgtggttatgacaaaggaggaggtgacagagctgctg
gcccgatacaagctgagggagaaccagctgcccaggatccaggctggggaccctgtggct
cgctacttcgggataaagcgtggccaggtagtgaagatcatcaggcccagcgagacagcg
ggcaggtacatcacctacagactggtgcagtga

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