KEGG   Zea mays (maize): 100273250
Entry
100273250         CDS       T01088                                 
Name
(RefSeq) uncharacterized protein LOC100273250
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
zma  Zea mays (maize)
Pathway
zma03020  RNA polymerase
zma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100273250
  09124 Replication and repair
   03420 Nucleotide excision repair
    100273250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zma03021]
    100273250
   03400 DNA repair and recombination proteins [BR:zma03400]
    100273250
Transcription machinery [BR:zma03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100273250
  RNA polymerase III system
   RNA polymerase III
     100273250
  RNA polymerase I system
   RNA polymerase I
     100273250
DNA repair and recombination proteins [BR:zma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100273250
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat DUF2073
Other DBs
NCBI-GeneID: 100273250
NCBI-ProteinID: NP_001141164
UniProt: B4FU06 A0A8J8YBX3
LinkDB
Position
8:177836783..177839573
AA seq 210 aa
MSAGLVTDEATVGRLYRIRRTVMQMLRDRGYLVVDHELATSRRDFLRKFGESFHREDLLI
NKYKKNDPSDQIYVFFPNDDKVGMKHIKKYVEMMTHENVSRAVLVLQQNLTPFAKSFLIE
LEPKIHLEIFQEAEMLINIKEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIA
RYYGLRRGQVVKIIRPSETAGRYVTYRYVV
NT seq 633 nt   +upstreamnt  +downstreamnt
atgtcggcggggctggtgaccgacgaggccaccgtggggcggctgtaccggatccggcgc
acggtgatgcagatgctgcgtgaccgtggctacctggtggtggaccacgagctcgccacc
agccgccgcgacttcctccgcaagttcggcgagtccttccaccgcgaggacctcctcatc
aacaagtacaagaagaacgacccatccgaccagatatatgtcttcttccccaacgatgac
aaggtagggatgaagcacatcaagaagtacgtcgaaatgatgacgcacgagaacgtctcc
agagctgtgctggttctccagcagaacctaactccgtttgcgaagtcgtttctcatagag
ctggagccgaagatccatctggaaattttccaggaggccgagatgcttataaacatcaag
gaacatgtccttgttcctgagcatcaggtgctcacaaacgaggagaagaagacgcttctg
gagcggtacaccttgaaggaaactcagcttccaagaatacagatcacggatcctattgct
aggtactacggcctgaggcgaggccaggtcgtgaagatcatcaggcccagcgagacggcg
ggcagatacgttacataccggtacgttgtatga

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