KEGG   Zea mays (maize): 100282338
Entry
100282338         CDS       T01088                                 
Name
(RefSeq) DNA-directed RNA polymerase II 16 kDa polypeptide
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
zma  Zea mays (maize)
Pathway
zma03020  RNA polymerase
zma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100282338
  09124 Replication and repair
   03420 Nucleotide excision repair
    100282338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zma03021]
    100282338
   03400 DNA repair and recombination proteins [BR:zma03400]
    100282338
Transcription machinery [BR:zma03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100282338
DNA repair and recombination proteins [BR:zma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100282338
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 100282338
NCBI-ProteinID: NP_001148722
UniProt: B6SLK8 A0A8J8YPX2
LinkDB
Position
4:248643476..248644474
AA seq 144 aa
MSGEEEENAAELKIGEEFLKAKCLMNCEVAIILEHKYEQIQQHASSESDPSSQVSQVFEK
SLQYVKRFSRYKNPDAVRQVRETLSRYGLAEFELCTLGNLCPDTSGEATALVPSLKSGGR
FVGDPGDEKIEKMLNDLSLIKKFE
NT seq 435 nt   +upstreamnt  +downstreamnt
atgtctggcgaggaggaggagaacgccgcggagctcaagatcggcgaagagttcctcaag
gccaagtgcctgatgaactgcgaggtggcgatcatcctggagcacaagtacgagcagatc
cagcagcacgcgtcgtcggagtcggacccgtcgtcgcaggtgtcgcaggtgttcgagaag
tcgctgcagtacgtgaagcgcttcagccgctacaagaaccccgacgccgtgcgccaggtc
cgcgagacgctgagccgctacggcctcgccgagttcgagctctgcacgctcggcaacctc
tgccccgacaccagcggcgaggccaccgcgctcgtcccctccctcaagtccggcggcagg
ttcgtcggcgaccccggggacgagaagatcgagaagatgctcaacgacctctccctcatc
aagaagttcgagtag

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