KEGG   Zea mays (maize): 103641221
Entry
103641221         CDS       T01088                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
zma  Zea mays (maize)
Pathway
zma03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103641221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zma03021]
    103641221
Enzymes [BR:zma01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     103641221
Transcription machinery [BR:zma03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     103641221
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 RNA_pol_Rpb2_2
Other DBs
NCBI-GeneID: 103641221
NCBI-ProteinID: XP_008662804
UniProt: K7TLH8
LinkDB
Position
10:complement(74223172..74236833)
AA seq 1259 aa
MGKPQTDGDQSPVNSDTDVMDCLNFDGHGDVEDPHKEVAKGEQQPSGEVDEQQSVMDVDL
TCITSVGDEGNEKQNAMDVDLKEILSEEDGGEGKASSDLPSQVPVDFNVASLEKFCKEAA
RSFFSETGLVSHQINSYDHFVSHGLQELFDSLGEITVEPDYDPSNKHGAWKHATVKFGRV
KLDEPVFMLENSDLEEQDLKFKPRHARLQKMTYASRMNVEMTVQVYIFDTSDKAKTGKDT
HVHKREIMTETKQINIGLLPVMVKSNLCWLHKSQKGDCPFDFGGYFLIKGTEKVFIAEEQ
RFLSRIWVTDHPSWDASYLSQIRREKINIKLVPSKSNESCKVINICFMGTIMPIWVAFFA
LGVSSDKEAFDMIDILDCDADIVNIISLTIKESHEEFEGFRTPGRARQYVDELIRKSKFP
PKESFDEYVCRYMFPGVNGFRSKALFLGYMVKCLLMAYSGNRKCDNKDDLRNKRLDLSCQ
LLRRELWTHIKRAERRMVKLMQRDLSNDGNLQDLRRYVDASIITNGLNRAFSTGSWRHPY
KKERCSGVVATLRRTNPLQMMSDVRKTRQWFAYAGTAGDARYPNPSYWGKLCFLSTPDAE
KCGFVKNLAVTAVVSSVVRKPLIDTFVSCGMKKLDDISLQDISGKDRIFLNGSLLGVCAD
PHELTLRLRSLRRSKLIDPQVEIKRDKHHKEVRVFSDPGRIMRPLLVVENLRRITRPKDG
LYSFQELIDQNIVELIGVEEEEDIQCAYGIRHLFSSREKEDWSSSGYTHCELDPSFLLGL
SCSLIPFGNHDNARRVQMQAEKISQQAIGYSPTNSQYRLDTLSHQMFYPQRPLFRTVVSY
GLGEAKTDCSSGRKDDFNTPEYFNGQNAIVSVNVHQGFNQEDSLVMNRASLERGMFRTLH
FKSYKAQVENKEITRRLKHRENINFGKVQSKRGKVDSLDSDGLPYVGASLQSGDIVIGKV
TESGEDHSAKLMHTEKGMVDKVVLSANDDGVNFATVTLRQSRSPCVGDKFASMHGQKGVV
GLLDSQENFPFTSQGIVPDMVINPHGFPTRQTPGQLLEAALGKGIALGGKVRYATPFTTP
TVEVIAEQLHKAGFCRWGEESVLNGQTGERMKSLVFMGPTFYQRLVHMAEDKVKFRNTGP
VHPLTRQPVEDKKRFGGVKFGEMERDCMLAHGAAANLHERLFTLSDFSRMHICQACERVA
NVIVRAAEGGGGKKVRGPYCLFCRSAERVVRVDVPYGSKLLYQELFSMGICLKFETEVR
NT seq 3780 nt   +upstreamnt  +downstreamnt
atggggaaaccacaaaccgatggtgaccagtcacctgtaaactcagatactgatgtgatg
gattgcctgaacttcgatggccatggagatgttgaagacccccacaaggaggttgcaaaa
ggggagcagcagccttctggcgaagttgatgaacagcagtctgttatggatgttgatttg
acatgtataacatctgtgggagatgaagggaatgaaaagcagaatgctatggatgtggat
ttgaaagaaatactatctgaggaagatggaggggaaggaaaggcttcttcagatctaccc
tcacaagtaccagtggatttcaacgttgcaagcctcgagaagttctgtaaagaagcagca
agatcgtttttcagtgaaactggactggttagccatcagataaactcgtacgatcatttt
gtctcccatggactccaagagctctttgattctcttggggaaatcactgtggaacctgat
tatgacccttcaaataaacatggtgcttggaaacatgcaactgtcaaatttggtagggtt
aagcttgatgagccagtgtttatgcttgaaaattctgaccttgaagagcaagatctcaaa
tttaagcctagacatgctcgcctccagaagatgacatatgcgtctaggatgaatgtggaa
atgactgttcaggtttatatattcgacacaagtgacaaagccaaaactggcaaggataca
catgttcataaaagagagataatgacagaaactaaacaaatcaacattggattgttacct
gtaatggtgaagtcgaatttgtgctggctgcataaatctcaaaaaggtgactgcccgttt
gattttggtggctactttttgatcaaaggaacagaaaaggtattcattgctgaagagcaa
aggtttttatcaaggatttgggtcacagaccaccccagctgggatgcaagttacctatct
cagatcagacgagaaaagatcaatataaaacttgttccgtccaaaagcaatgaaagctgc
aaagtcataaacatttgcttcatgggtacgattatgccaatttgggtagcattttttgca
cttggtgtatcgtcagacaaggaagcttttgatatgattgatatcctagactgtgatgct
gacatagttaacataatatcattaactattaaagaatctcatgaagaatttgaaggcttc
cgcactccaggtagagcccgtcaatatgttgatgagctgatcagaaaatcaaagtttccg
cccaaagaatcctttgatgagtatgtttgtaggtatatgtttcctggtgtcaatgggttt
aggagcaaggcacttttcttgggttacatggtcaaatgtctgctaatggcatactctggc
aatcgaaaatgtgataataaggatgatctccgtaacaaaaggctagatctttcctgccaa
ttgcttcggagagaactctggactcatattaaaagagcagaaaggcgcatggttaagctc
atgcagagagatttgagcaatgatggcaacttgcaagaccttaggcgttatgtggatgca
tcaattattaccaatggattgaaccgggccttctccactggttcttggcggcatccttat
aaaaaagaaaggtgttcaggggttgtagcaacccttcggagaacaaatccacttcaaatg
atgtctgatgttaggaagacgcgacagtggtttgcatatgctggaacggctggagatgca
agatacccgaatccatcctactggggaaaattgtgttttttgtccaccccggatgctgaa
aaatgtggatttgtgaaaaaccttgctgttactgctgtggttagttctgtagtgaggaaa
ccgttgattgatacatttgtttcttgtggaatgaagaaactggatgatatttctctacaa
gatatttctgggaaggacaggattttcttgaatggaagcttgctaggagtatgtgcagac
ccacacgaattgactttgcgtttaagaagcttgaggcgtagcaagctaattgatcctcag
gttgaaatcaaaagggacaagcaccataaagaagttcgtgtattttctgatccaggcaga
attatgagaccacttcttgtagttgaaaatctaagaagaatcacaagaccaaaagatgga
ctatactcttttcaggaacttatagatcaaaacatagttgagctgattggtgttgaagaa
gaggaggatatccaatgtgcgtacggaattagacatctattctccagcagggagaaagaa
gactggtcttcttctggctatactcattgtgaacttgatccttctttcttgctagggctg
agctgcagtctcattccctttggcaaccatgataacgctaggagggttcagatgcaagct
gaaaaaatatcacagcaggctatcggctactcccctacaaattctcagtacagactggac
accctttcacatcaaatgttctatccacaaagacccttgtttagaactgtggtgtcctac
ggtcttggagaggcgaagacagactgcagctccggacgaaaagacgacttcaacacacca
gaatatttcaacggacaaaacgcgatagtctcagtgaacgttcatcagggattcaaccaa
gaagactctctggtgatgaatagggcctccttagagcgtggcatgtttcgcacgctacat
ttcaagagctacaaagcacaggtcgagaacaaagagatcacaaggcgtctcaagcacagg
gaaaacatcaatttcggtaaagtgcagagcaagagggggaaggtcgacagtctggacagt
gatggcttaccatacgtcggagcaagtcttcagagtggtgacattgtcattggtaaggtc
acggagtctggtgaagatcatagcgccaaactgatgcatactgagaaagggatggtggac
aaggttgttctttcggcgaacgatgatggggttaactttgcaactgttactctaagacag
tctcgctcgccatgcgtcggagacaagtttgccagcatgcatggacagaaaggagttgtt
ggcctgttggattctcaggagaatttcccattcacttcccaagggattgttccagacatg
gtcataaacccacatggttttccaactcgtcaaactcctggacagctgcttgaggctgct
ctggggaagggcatcgcccttggtgggaaggtcaggtacgcaacgccgttcaccactccg
accgtggaggtgatcgccgaacagctgcacaaggccgggttttgcaggtggggtgaggag
agcgtgctgaacgggcagaccggcgagcggatgaagtcgctggtgttcatggggccgacc
ttctaccagcggctggtccacatggcggaggacaaggtgaagttccggaacacgggtccg
gtgcacccgctcacgcggcagccggtggaggacaagaagcggttcggcggcgtcaagttc
ggggagatggagcgcgactgcatgctggcgcacggcgccgccgccaacctccacgagcgg
ctcttcaccctcagcgacttctcgcggatgcacatctgccaggcctgcgagcgggtggcc
aacgtcatcgtgcgggccgccgagggcggcggcggcaagaaggtgcgcgggccctactgc
ttgttctgccgctccgcggagcgcgtcgtccgggtcgacgtgccgtacggctccaagctg
ctgtaccaggagctcttcagcatgggcatctgcctcaagtttgaaaccgaggtccgctag

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