Zea mays (maize): 541967
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Entry
541967 CDS
T01088
Name
(RefSeq) DNA-directed RNA polymerase II subunit 1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
zma
Zea mays (maize)
Pathway
zma03020
RNA polymerase
zma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
541967
09124 Replication and repair
03420 Nucleotide excision repair
541967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
541967
03400 DNA repair and recombination proteins [BR:
zma03400
]
541967
Enzymes [BR:
zma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
541967
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
541967
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
541967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
MIF4G_like_2
TACC_C
Motif
Other DBs
NCBI-GeneID:
541967
NCBI-ProteinID:
NP_001292746
UniProt:
K7TLU2
LinkDB
All DBs
Position
10:81051696..81060533
Genome browser
AA seq
1850 aa
AA seq
DB search
MDARFPYSPAEVAKVEFVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI
DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDETK
FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQDTDEPIKKRGGCGAQQPNITVD
GMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYARP
DWMILQVLPVPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITE
FAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSART
VITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRE
DGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTF
RLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTL
LGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPTILKPRPIWTGKQVFNLIIPKQINL
IRFSAWHSEEEKGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDAAR
KFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMETINDTISKAKNAVKELIKKAHEKQLE
AEPGRTMMESFENRVNQVLNKARDDAGSSAQNSLSESNNLKAMVTAGSKGSFINISQMTA
CVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREG
LIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKL
DSLKMKKPEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRYQL
GSEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVVPG
DDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGE
MIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP
QVNQKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDTEFVQSYYEMPDEDID
PDKISPWLLRIELNREMMVDKKLSMADIAEKINREFDDDLSCIFNDDNADKLILRIRITN
DEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKEGKVNTFYQDDGFKAA
NEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGS
YVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDHL
RGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVEGLDFGMTPARSPITGTPY
HEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAFSPFPSPGGYSPSSGGYSPSSPVFTP
EKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYS
PTSPSYNPSSAKYSPSHAYSPSSPRMSPYSQTSPSYSPTSPTYSPTSPSYSQPSPSYSPT
SPFNTSGGPSPDYSPTSPNYSPSGSYSPTAPGYSPSSTGQGNDKDDKSAR
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgaggttcccgtactcgccggccgaggtggccaaggtcgagttcgtgcagttc
ggcatcctcagccccgacgagatcagacaaatgtcggtgattcaaatagaacacgcagag
accatggagaggggcaaaccgaagcctggtgggctcagtgaccctcgattggggactatc
gaccggaaaattaagtgcgagacatgcatggcagggatggcagagtgtccaggccacttt
gggcaccttgagcttgccaagccgatgttccacatcggattcattaagactgtgctctcc
atcatgcgttgtgtttgctttaactgctccaagatcctcgcggatgaggatgaaaccaaa
tttaagcaggctttaaaaatccggaatccaaagaatagattgaagaggatatatgatgct
tgcaagagcaaaaaagtctgtgcaggtggcgatgaccttgatgttcaggaacaggatact
gatgagcctattaagaaaagaggtggctgtggtgctcagcagccaaatattacagtcgat
ggcatgaagatggttgctgagtttaaagctccaaagaagaaaactgatgatcaggatcaa
ctccctgagccagtggaacgcaagcaaatcctctcagctgagagggtccttaatgttctt
aagcgtataagtgatgaggactgtcttctgttgggcctgaatcccaaatatgcccgtcct
gattggatgatacttcaagttcttcctgttcctccaccccctgttagaccatctgtcatg
atggacacctcttccagaagtgaggatgatctgactcatcagttagctatgataatacga
cataatgagaatttgaggaggcaagagagaaatggtgctccagctcacattataacagag
tttgctcagctgttgcaatttcatattgcaacatacttcgataatgatcttcctggccaa
cccagggccacacaacgttctggaaggcctattaaatcaatttgcagcaggctgaaagct
aaagaaggcaggattagaggaaacttgatgggcaagcgtgttgatttctcggcccgtaca
gttatcacaccagatccgaacataaacattgatgaattgggagtaccatggagtattgct
ttgaacctgacatatcctgaaactgtcactccatataatattgagaggttgaaggaactt
gttgaatatgggcctcaccctcctccaggaaagaccggtgcaaaatatattatcagggaa
gatggtcagaggcttgatcttcggtatgtgaagaaaagcagtgatcagcatctggagctt
ggttacaaggtggagaggcatctcaatgatggggattttgttcttttcaatcggcaacca
agtcttcataaaatgtctatcatggggcatcgcatcaaaattatgccctactcaactttc
cggttgaacttgtctgtcacttcaccatacaatgctgacttcgacggtgatgagatgaat
atgcatgtcccccagtcatttgagaccagagcagaagttctggagttaatgatggtgcca
aaatgcattgtctctccacaatcaaataggcctgtaatgggtattgtccaagacacactg
cttgggtgtcgcaaaattactaaaagggacactctaattgaaaaggatgtatttatgaac
atcttgatgtggtggcaagatttcgatggaaagattcctgcacctaccattttgaaacct
aggcctatttggactgggaaacaagtttttaacttaattatccccaagcaaataaattta
attcggttttcagcatggcattcggaagaagaaaaaggatttattactcccggtgatact
atggtcaggatagagaagggagagcttctgtctggcacactttgcaaaaagagtcttgga
acaggctccggaagtcttatccatgtcatttgggaagaggttggtccagatgctgcccgg
aagttcttaggacacacacagtggcttgtaaactactggcttcttcaaaatggtttcagt
attggaattggggatactattgcagatgcatccaccatggaaacaattaatgatacaata
tctaaagctaagaatgctgtgaaggagcttattaaaaaagctcatgagaagcagttggaa
gctgagccaggacgcactatgatggaatcatttgaaaacagagtgaaccaggttcttaac
aaagcccgtgatgatgctggtagcagtgctcagaatagcttgtctgaaagcaacaatttg
aaggctatggtcactgcaggttcaaaaggcagtttcattaacatttcacaaatgactgct
tgtgtgggacagcagaatgttgagggcaagcggatcccttttggtttcattgatcggacg
ttgccacatttcacaaaagatgactatggtcctgaaagtcgtggatttgtggaaaattct
tacctccgaggtctgacaccgcaagaatttttctttcacgctatgggtggtagggaaggt
cttatagacactgctgtgaaaacctctgagactgggtatatccagaggagacttgtgaaa
gctatggaggacatcatggttaaatatgatggtactgtaagaaattctcttggagatgtc
atccagttcttgtatggagaagatggcatggatgctgtttggattgaatctcaaaaattg
gactcattgaagatgaagaagcctgagttcgataatgtattccgttatgagctggatgat
gagaattggagacctaactacatgctacctgaacatgttgacgatttgaagaccatacgt
gaattcagaaatgtgttcgaggcagaggttcaaaagctagaagctgatcggtaccagctt
gggtctgagatcaccacaactggtgacaattcgtggcctatgcctgtgaacctcaagcga
ctcatctggaatgctcagaagacattcaagattgattttagaagaccttctgacatgcac
ccgatggaaattgtggaagcgatagataaactgcaagaaagacttaaggttgtacctggt
gatgatgctatgagcattgaggcccagaagaatgcaaccttgttctttaatatcctactt
cgtagcacgtttgctagcaagagggtcttgaaggaatacaggcttacaaaggaagctttt
gaatgggttattggtgagattgaatcgaggtttcttcagtctttggtggcccctggcgag
atgattggatgtgtggctgcacaatctattggagaaccagcaactcagatgaccctgaat
accttccattatgctggtgtcagtgccaagaatgtcacccttggagttcccaggttgagg
gagatcattaatgttgccaagaagataaagacaccatctttgtctgtttacctgaagcct
caggtgaaccagaagaaagaattggctaagaatgtccagtgtgctttggagtacactaca
ctgcgtagtgttacccacgccacagagatatggtatgatcctgatcctctagggaccatc
attgaagaggacacagagtttgttcagtcctattatgaaatgcctgatgaggacattgac
ccggataaaatttctccttggttgctgcgtattgagcttaaccgtgagatgatggttgat
aagaagttgagcatggctgatattgccgagaagattaaccgtgagtttgatgatgattta
tcatgcattttcaatgatgataatgcggataagcttatcctccgtatccgcatcacaaat
gatgaagctccaaaaggagaaatacaagatgagtctgctgaggatgatgtcttcctaaaa
aagatagagggcaatatgttgacagagatggcgcttcgaggcattccagatatcaacaaa
gtgttcatcaaagaagggaaggtcaataccttctatcaagatgacggtttcaaagcagct
aatgaatggatgcttgatacagaaggtgtgaatcttttagctgtcatgtgtcacgaggat
gttgatgctacaaggacaacaagtaaccatctgattgaagtgattgaggtacttggaatt
gaggctgtccgtcgatctctcttggatgagcttcgggtggtgatatctttcgatgggtca
tatgtgaactaccggcatctggccattctttgtgatacaatgacatacagaggtcacttg
atggctattacaaggcatggtatcaaccgcaacgacactggacctcttatgagatgttcc
tttgaagagactgttgacatcttacttgatgctgctgtatatgctgaatctgaccacctg
agaggtgttactgaaaacataatgcttggtcagcttgctcctattggtactggaggctgt
gcactatatctgaatgaccagatgttgcagcaagcaattgaacttcaactcccaagctat
gtcgaaggcctagactttggcatgactccagcacgatcacccatcactgggacaccttac
catgaaggaatgatgtcgccaagttatctgctgagtccaaacatcagggcttcgcctatt
aatacagatgcttcgttctcgccgtatgttgggcacatggcattctcaccattcccttca
ccaggtggttactccccatcgtcagggggatacagcccatcttctccggttttcacccca
gagaaaggatatagccctctctctccatcatatagccctgcatcaccaagctatagtccc
acctcaccgtcttacactcctggctctcccacctacagtccaacaagcccgaattactcc
ccaaccagcccgacgtactcgcctaccagcccatcgtactcacccacatctccgagctac
agcccaacatcaccaagctacagccctacatcaccaagctacagccctacatctcctagc
tatagtcctacatcaccaagctacagccccacctcaccagtttatagcccaacctcacca
gcatacagccccacatcacccgcttacagccccacatcgccatcctacagtccaacttca
ccatcttatagccctacatcaccttcatacagccctacgtccccttcatacagccctacc
tccccctcatacagccctacctctccctcctacagcccgacatcacctgcttacagcccg
acatcaccaggatacagcccaacgtcaccgagctacagccctacatctccgagctacagt
cctacatctccgagctacaatccttcatcagccaagtacagcccttcacatgcatactct
ccaagcagccccaggatgagtccatacagccagacttctccaagctacagtccaacgtca
ccgacttactctcctacatcaccatcatattcacaaccaagtccatcgtacagcccaacg
agcccgttcaacacctctggaggacccagcccagactacagcccgacctctccaaattac
agccctagcggaagctactcccccactgcaccgggctactccccgtcgtccacaggccag
ggtaatgacaaggatgataagagcgctcgttga
DBGET
integrated database retrieval system
