KEGG   Zygotorulaspora mrakii: HG535_0C06230
Entry
HG535_0C06230     CDS       T06976                                 
Name
(RefSeq) uncharacterized protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
zmk  Zygotorulaspora mrakii
Pathway
zmk03020  RNA polymerase
zmk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HG535_0C06230
  09124 Replication and repair
   03420 Nucleotide excision repair
    HG535_0C06230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zmk03021]
    HG535_0C06230
   03400 DNA repair and recombination proteins [BR:zmk03400]
    HG535_0C06230
Transcription machinery [BR:zmk03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     HG535_0C06230
  RNA polymerase III system
   RNA polymerase III
     HG535_0C06230
  RNA polymerase I system
   RNA polymerase I
     HG535_0C06230
DNA repair and recombination proteins [BR:zmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      HG535_0C06230
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 59235966
NCBI-ProteinID: XP_037143996
LinkDB
Position
3:join(1222441..1222460,1222543..1222999)
AA seq 158 aa
MSDYEEAFNDGAEHFEDFDVEHFSDEENFAEPVNGNGNEGGEVKAENGHTVIAGGTGPED
YQNYEQTRRKTLKEKAIPKDQRITTPYMTKYERARILGTRALQISMNAPVFVDLEGETDP
LRIAMKELAEKKIPLVIRRYLPDGSFEDWSVEELIVGL
NT seq 477 nt   +upstreamnt  +downstreamnt
atgtccgattacgaggaagctttcaatgatggtgcagagcactttgaggatttcgatgtt
gagcacttctcagatgaagagaactttgctgagccagtaaatggaaatggcaacgagggg
ggtgaagtgaaagcagagaatggacacactgtaattgctgggggaacaggaccggaggac
taccaaaattacgagcagacgcggaggaaaactctgaaagagaaagctatccctaaggac
cagaggataacgacaccatacatgacaaaatatgagagggccagaattttaggaacgcga
gcattgcagatttcgatgaacgcaccagtttttgttgatttggagggtgagactgatcca
ctaagaattgcaatgaaggaacttgccgagaaaaaaatccctttggtgataagaagatat
ttaccagatggctcatttgaagactggagtgtggaagagctaattgttggtttgtga

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