Zymomonas mobilis subsp. mobilis ZM4: ZMO0227
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Entry
ZMO0227 CDS
T00221
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
zmo
Zymomonas mobilis subsp. mobilis ZM4
Pathway
zmo03030
DNA replication
zmo03410
Base excision repair
zmo03420
Nucleotide excision repair
zmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ZMO0227
03410 Base excision repair
ZMO0227
03420 Nucleotide excision repair
ZMO0227
03440 Homologous recombination
ZMO0227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zmo03032
]
ZMO0227
03400 DNA repair and recombination proteins [BR:
zmo03400
]
ZMO0227
Enzymes [BR:
zmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ZMO0227
DNA replication proteins [BR:
zmo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ZMO0227
DNA repair and recombination proteins [BR:
zmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ZMO0227
NER (nucleotide excision repair)
GGR (global genome repair) factors
ZMO0227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
DprA_N
Taq-exonuc
HHH
HHH_2
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AAV88851
UniProt:
Q5NR03
LinkDB
All DBs
Position
219475..222240
Genome browser
AA seq
921 aa
AA seq
DB search
MTEYSEKPHLILIDGSGYIFRAYHRLPPLTNKAGLPAGAVYGFTTMLWKLVENIRKQDDA
PTHFAVIFDSSRKSFRQDLYPAYKAHRPPPPEDLVPQFPLIREATRAFSVPSIEQEGLEA
DDIIACYSRVALERGFQVTVYSSDKDLMQLIQPRLNLFDPVNNCLIGSEQVVKKFGVVPE
KLGDLLALMGDTADNIPGVPGVGPKTASRLINEYGNLSEILESAPEIKQPKLRQNLIEYK
ETAILSRELVALVDDKPLPEPLDNLVVKGVDMTPLRDFLSEQGFSSLLARAGGGQSAPVA
DGSKEMAASSSQSFDPDAYETVIDEKALDRWIADIYQKGQVAVDTETDNLDATQAQLVGV
SLSTEAGKACYIPCGHGGHDLLDQKPDQMDLLLLVKKLKPVLEDPSILKIGQNIKYDMIV
LSRYGISVQPFDDTMLLSYDLDAGRHGHGMDELSLLYFDHQPISFKSVCGTGKSAITFNH
VPIPAATRYAAEDADITFRLWALLKPRLSSDGATRIYEEVDRPLPPVIARMEQAGITVDS
VALHHLSSRFAHDISRLEEEIYVLAGCRFLISSPKQLGEVLFGTMGLAGGKKSKSGQYST
NVTELERLAAEGEAIASKILEWRQLSKLKSTYSDALIGKVNPETGRVHTSFSLVGAQTGR
LSSTDPNLQNIPIRTEIGREIRNAFIAKKGHLLLSADYSQIELRLAAHVADEKALLQAFR
EKEDIHALTAKQLFGHVDRESRARAKTINFAILYGISAWGLAARLEIDRFSAQEMIDRYF
ERFPAIRHYIDRTLDFVRLHGYVETPFGRKTHLPAIKSRKVTERQAAERQAINAPIQGMS
ADIIKRAMVRMEPALAKAGLSSVKMLLQVHDELIFEVPEEDIEKAKPVIRQVMMEAALPI
VQLSVDLEVEIGTGTSWGAAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaatattctgagaagccccatcttattctgattgatggatcgggttatattttt
cgtgcctatcatcgtctccccccgttaacgaacaaggctggactgcctgcgggagcggtt
tatggttttaccaccatgctttggaagctggtggaaaatatccgcaagcaggatgatgcc
ccgacccatttcgcggttatttttgattcaagccgcaaaagttttagacaggatttatat
ccggcctataaagcccatcggccgccgccgccggaagatttggtgccgcaattcccgctt
atcagagaagcgacccgcgccttttctgtgccttctatcgagcaggaaggtttggaagcc
gacgatattatcgcctgttattcacgggttgccttagaacgcggatttcaggtgacggtc
tattcttcggataaagatctgatgcagttgattcagccgcgattaaatctttttgatccg
gtgaataattgcctgattggttcggaacaggtcgttaaaaaatttggtgttgtgcctgaa
aaattgggcgatcttctcgccttgatgggggataccgccgataatatacctggtgttccc
ggtgtgggcccgaaaactgccagccgccttatcaatgaatatgggaatctgagcgagatt
ttggaatcagcaccggaaatcaagcagccgaaattaagacaaaatctaatcgaatataaa
gaaacggctattttatcccgtgaattggtggctttggttgatgataagcctttacccgaa
ccactggataatctggtggtgaagggggttgatatgactcctttgcgggatttcttgagc
gagcagggcttttcttctttattggcgagagctggaggagggcagagcgcacccgttgct
gatggtagtaaagagatggccgcttcttcttcgcagagtttcgaccctgatgcctatgaa
accgtgatcgatgagaaggctttagatcgctggatagcggatatctatcaaaaaggtcag
gtcgcggtggatactgaaaccgacaatctggatgcaacccaagcgcaattagtgggtgtc
agtttgtccacggaggcagggaaagcctgttatatcccttgtgggcatggaggccatgat
cttcttgaccagaagcccgatcaaatggatttattgcttcttgtcaaaaagttaaagccg
gttttggaagatccctctattctgaaaatcggtcagaatatcaaatatgatatgattgtt
ctgtcccgatacggaatttcggttcagcccttcgatgataccatgcttttgagctatgat
cttgatgcgggtcgccatggccacggtatggatgaattgagtcttttgtattttgaccac
cagcccatcagttttaaatcggtatgtggcacgggaaaatcggcgataacctttaaccat
gtgcctattccggcggcgacgcgttacgccgccgaagatgccgatattacttttcggttg
tgggcgttattaaaaccgcgcttatcatccgatggtgctacccgaatttacgaggaggtt
gaccgtccgctaccgccagtgattgctcggatggagcaggccggcattacggtcgatagc
gtcgctttgcatcatctgtcttcccgttttgctcatgatatcagtcgtctcgaagaagaa
atctatgtcttggcaggctgccgtttcttgatttctagccctaagcagttgggtgaagtg
ttattcgggacgatggggcttgctggtggtaaaaagagcaaaagcggacaatattctacc
aatgttacggaattggaacgattagcggccgaaggtgaggcgattgcctccaagattttg
gagtggcggcagctttcaaagctgaaaagcacctatagcgatgctttgattggcaaggtt
aatcctgaaacggggcgagtccataccagctttagtctggttggggcgcagactggccga
ttatcttctactgatccgaatttgcagaatattcctatccgcactgaaattggtcgggaa
atcagaaatgcctttatcgcaaaaaaagggcatctgttattatcggctgactattcgcag
atagagttgagattggcggcgcatgtagccgacgaaaaagccttattacaagcctttcgg
gagaaagaagatattcacgctttgacagccaaacagttatttggtcatgttgatcgtgaa
agtcgagcgcgtgccaagaccatcaattttgctattctctatggtatttcggcttggggt
ctggcagcgcggctggaaatagaccgtttttcagcgcaggaaatgatagaccgctatttt
gaacgctttcctgctattcgtcactatattgatcggacattggattttgtccgtttgcat
ggttatgttgaaacgccttttggtcgtaagacccatttgcctgcgataaaaagccgtaaa
gtgacagaaaggcaagccgctgaaagacaggcgatcaatgcgcctattcaaggcatgtct
gctgatattatcaagcgagccatggtgcgaatggagcctgctttggcaaaagccggactc
tcttcggtaaaaatgcttttacaggttcatgatgaactgatttttgaagtccccgaagaa
gatattgaaaaagcgaaacctgttattcgtcaggtgatgatggaggcggctttaccgatt
gttcagttgtcggttgatctggaagtcgaaatcggcacggggacaagttggggtgccgca
cattga
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