Zootermopsis nevadensis (dampwood termite): 110831252
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Entry
110831252 CDS
T05136
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110831252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zne03021
]
110831252
Enzymes [BR:
zne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110831252
Transcription machinery [BR:
zne03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110831252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DUF726
Motif
Other DBs
NCBI-GeneID:
110831252
NCBI-ProteinID:
XP_021922720
LinkDB
All DBs
Position
Unknown
AA seq
1736 aa
AA seq
DB search
MRKLKSKGNKILHLNPSALSFSIFSQDEIKKLSEVKITTPLSFNALGHPLKAGLYDPALG
PLHENSEPCYTCSNNVYNCSGHVGYIELSLPVVNPLFHKTIFHILKLACLNCHTLQVKGV
AKVLFITKLKLLGEGLVTEAQETEEVVGDILSSEDSTVVDEVKAELMKEKLDEYYKNIMK
EGSTDCKTPPKTKFVESLINDLLNAMDKSVLDMKKCLNCKAPIIKILSFQNKLVTTVLKA
DESGGAENGGENKGKKITTVILPDESRDHLRKIWRNEKEFMTTLSPVLKNCDMKHPTDTF
FLDLIAVPPPKMRPVNFVNNKLVEHPQTQAYKLIIQDSIIIQNITRTIRDGDTSSLPEEA
KDLLEQIRGDTPEEKLMLAWQHLQSDVDHLMDSGMGQSNQRGLKISPGIKQVIEKKEGII
RMHMMGKRVNFAARSVITPDPCLSIEEIGIPELFAKSLTYPVPVTEWNVADLRMMVLNGP
DVYPGAVLVENEDGTKTRISTTDHIQRESVAKRLLTPGDTSDIYKGMKVVHRHLCSGDVL
LLNRQPTLHRPSIMAHIARILKGERTLRLHYANCKAYNADFDGDEMNAHFPQNELARSEA
YNLLNVNNQYLVPKDGTPLSGLIQDHIVAGVHLSVRGRFFGRDEYQQLVFQALSHRVSKI
KLLPPAIIKPLPCWSGKQIISTVLINIVPTGQYPISLTSTAKIADKSWMVEEPRVWQAGG
TPFNDSNTMSEAEVIIRKGELLCGVLDKTHYGATPYGLIHCMNELYGGSCSSVLLTAFSK
LFTSFLQRNGFSLGVEDILVVKAAEEQRIHFISRGRKVGNKAVRSAVDLPKTATRSEIKE
KMEDVYQNYNRGRAMIDSSYKSMLDNITNKINKACIPNGLLKSFPYNNLQLMIQSGAKGS
TVNAMQISGLLGQIELEGRRPPHMASGKTLPSFTRYDVTPRAGGFVDGRFMTGIKPQEFY
FHCMAGREGLIDTAVKTSRSGYLQRCLVKHLEGLVVRYDLSVRDSDGSVVQFCYGEDGRD
VMKAQFMKEKQIPFLSENCKAIKNVPLEMLQDDKTSSHIAKCKRKIRKWVKKNGSPFQKN
RTTPFTTFSVDVQKSGSQKSKKLNKKTGRSKRAEEICSLWRDADSETLERYSSVGLKCPD
PVTAYFRCYREFGALTEKLEQLMNDYLKNRPSKTKHEFCEMMFVKSLQSHSDPGEPVGLL
AAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLRELLMTASKNIKTPNMDVPFLPDVHH
LKNKAERLKLKLCRVTVSDVLSCVDVTDKLEIYPSRMQTYYMQFHFLPHEAYKSRFCVTP
SYVLQYAETQFFKNIFYALRKKMKFRGSVIQVEKSKSSNNEDANDENVDPENVPEVQSDH
DLVDRAKKAGVGEEHESSDEEQEGEDDDATTARNRQRHMENQEYEEPEEEEVEEDVAMYD
KSADEGMEEAESEEGVDKLMDDSSLHNLAEGEHDSDRMRHEHEDNDDLDDDDMLEADSEI
PLLQDMPKNVNVLTYEARVKRVISSMEYIVDYDYDTEQELWCKLKLAVPLHYKRLDLTDL
LREVAANSVIWEIPSLKRAITYVNPNAQNLSLKTEGINFQEMFKYDKLLDLNRLYSNDIH
QIANIYGIEAARRVIVKEMQDVFKVYGIVVDPRHLLLVADYMTFNGKYEPFSRKTIEDHA
SPLQQMSFESSVNFLKIAVTRGKRDELVSPSSRLMVGQPFIGGTGSFSLLHKLSIP
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaattaaaaagcaaaggtaacaaaatattgcacctgaatcctagtgcattgtca
ttttctattttttcacaagatgaaattaaaaaattaagtgaagtgaagattaccactcca
ctttcatttaatgcacttggtcatccgctgaaagccgggctttatgatccagcattaggt
cctctacatgagaacagtgagccatgttacacatgttcaaacaatgtatacaactgttct
ggacatgttggttacatagaactttcactaccggttgtaaatcctttgttccacaaaaca
atcttccatattctgaagttggcatgtttgaattgtcacacacttcaagtaaaaggggtt
gccaaagtattgtttataacaaagttaaaacttttgggtgagggtcttgtaacagaagct
caagaaacagaagaagttgttggagacatcctctcgtcagaagatagtacagtggttgat
gaagtaaaagcagagttgatgaaggagaaattggatgaatactacaagaatataatgaaa
gagggaagtacagattgtaaaacacccccgaagaccaaatttgtggaatccttaataaat
gaccttcttaatgcaatggacaaatctgtgttggatatgaagaagtgtttaaattgtaaa
gctccgataattaaaattttatcatttcaaaataaattggtgactacagtccttaaagct
gatgaatcgggaggagctgagaatggtggagaaaataaagggaaaaagattacaactgta
atcttgcctgatgaatcaagggatcatttacgtaagatttggagaaatgagaaggaattc
atgaccaccctttcaccagtgttaaaaaattgtgacatgaaacaccccactgatactttc
tttcttgacctgattgctgttccaccacccaaaatgagaccagtgaattttgttaataat
aagttagttgagcatccacaaacacaagcctacaagctcattattcaggactcgataatc
atccaaaatattacgaggacaatccgagatggggacacaagcagcctgccagaagaagca
aaggacctgttagaacaaatccgtggcgacactcctgaagagaagctgatgctagcgtgg
cagcatctgcagtctgatgtggatcacttgatggatagtggaatgggccagtccaatcaa
agaggtctgaaaattagcccaggtatcaagcaggtgatagagaagaaggaaggcattata
cgaatgcacatgatggggaaacgtgttaattttgcggctcgttctgtaattactccagat
ccgtgtttgagcatcgaagaaattggtattccagaattatttgccaaatctttaacatat
cctgtgccagttactgaatggaatgtcgcggatttacgcatgatggttctcaatggacct
gatgtttacccaggagctgtgttggttgaaaacgaagatggtactaaaacaaggatatct
accactgatcatattcaacgagaaagtgttgcgaagcgtctcttaactcctggtgacaca
tctgacatatataaaggaatgaaagtagtacaccgacatctttgcagtggagatgtgcta
cttttgaacagacagcccactctgcatcgacccagcatcatggcacatattgcgcgcatt
ctgaaaggggagagaactttgagactgcactatgccaactgcaaagcctacaatgccgat
tttgacggtgatgaaatgaatgcccatttccctcagaacgaactggctcgcagtgaagca
tataatctcctgaatgtaaataaccagtacttggtgccgaaagacggtacaccactgagt
ggtttgattcaggatcatattgtagcaggagtacatctttcagttcgaggaaggtttttt
ggaagagatgagtaccagcagcttgtgttccaggcactgagtcacagggtgagcaaaatt
aagctgttaccaccagcaatcataaagccacttccatgctggtctgggaagcaaatcatt
tcaacagtgcttataaacattgtacctactggacagtatccgattagtctcacgtcaact
gcaaaaattgcagacaagtcatggatggtcgaggagcctagggtatggcaggcaggagga
accccatttaatgattcaaatacaatgtccgaagcagaagtgataattcgaaaaggagaa
cttttgtgtggtgttctagataaaacccattatggtgctacgccttatggattgattcat
tgcatgaatgagttgtatggaggaagttgttcaagtgtactgttgacagcgttttcaaaa
ttattcacttcatttcttcaaagaaacggtttctcacttggtgttgaagacattttggtg
gtaaaggctgctgaagaacaaagaatacacttcatctctcgtggaagaaaggttggcaac
aaggctgtgcgatctgcagttgacctgccgaaaaccgcaacacgaagcgagataaaagaa
aaaatggaagacgtataccaaaactacaatagagggagagcaatgatcgacagttcgtac
aaaagcatgcttgacaacatcaccaataaaataaacaaggcttgcattcctaacggactt
ctgaaaagtttcccgtacaacaacttacaacttatgattcagtctggggctaagggctct
accgtaaatgccatgcagatctccggcctattgggtcaaatagagttggaaggcagacga
ccgccacacatggcgtctgggaagaccctgccgagtttcactagatatgatgttactcca
agagcagggggttttgtggatggacgatttatgactggtataaagccacaggagttttac
ttccattgcatggctggcagagagggtttgattgatacagctgttaaaacaagcaggagt
gggtatcttcagcgatgcttggttaaacacttggaaggcttagtggttcgctatgatttg
tctgtcagagacagcgatggaagtgtcgttcagttctgctatggggaggatggaagagat
gttatgaaagcccaatttatgaaggagaagcaaattcctttcctttcagagaactgtaaa
gcaatcaaaaatgttcctttggaaatgctccaggatgacaaaacgtcatcccacatagca
aagtgtaagagaaagattcggaaatgggtaaaaaagaatggaagcccctttcagaagaac
agaacgacccctttcaccacgttttctgtcgacgtacagaaatcgggttcgcagaaatcg
aagaaattgaacaagaagactgggcgatctaaacgtgccgaagaaatctgcagtctttgg
agagatgccgactcagagactctggaaagatacagctctgtaggtctgaagtgccctgat
cctgtcactgcatattttcgttgttatcgtgagtttggggctcttacagagaaactggag
cagcttatgaatgattatttgaagaacagaccatcgaaaacaaagcatgagttttgtgaa
atgatgtttgtaaaatcgctgcagtctcattcagatccaggggagccagtaggactgctg
gcagctcagtctataggagagccatctacccaaatgactctcaatacattccactttgct
ggacgaggtgagatgaacgttacacttggcatacctcgattgcgtgagctgctcatgacc
gcttcaaaaaatatcaagactccgaacatggacgttccatttctgccagatgtacatcat
ttaaagaataaagctgagcggctgaaactgaagctttgccgagtaacggtttctgatgtg
ttgagctgcgtcgatgtgacggataagttggagatttatccttccaggatgcagacttac
tatatgcagttccattttcttccacacgaagcctataagtccaggttttgtgtaacgccc
tcatacgttctgcagtatgccgagacacagttttttaagaacatcttttatgccttgaga
aaaaaaatgaaattcaggggttctgtcattcaggttgagaaatcaaagtcgtcaaataat
gaagacgctaatgatgaaaatgttgatccagaaaatgtcccggaagtgcagtcagatcac
gatttggtggacagagcgaagaaggctggtgttggcgaagagcacgagagctctgacgaa
gaacaagagggtgaagatgatgatgctaccacggcccgcaatagacagaggcacatggaa
aatcaagaatatgaggaaccagaggaggaggaggtcgaagaagatgtcgcgatgtatgat
aaatctgcagacgaggggatggaggaagccgagagtgaggaaggagttgacaaattgatg
gacgatagttctctgcacaacttagccgaaggcgaacatgattctgacaggatgcgtcat
gaacatgaggataacgatgatctggatgatgatgatatgttggaagctgacagtgaaata
cctctccttcaggatatgcccaagaatgtgaatgtactcacgtacgaggctagggtgaaa
agagtgatttcgtcaatggagtacatagtggattacgattacgatactgaacaagaactg
tggtgtaaattgaagttagcggtgccattgcattataagaggcttgatttaacggatttg
ctgagagaagtggctgctaattcagtcatttgggaaataccctcgctcaaaagagccatt
acgtatgttaacccaaacgcacaaaatctgtcgctaaagacagaaggaatcaacttccag
gaaatgtttaaatatgataagcttctcgacctcaaccgactgtattcaaacgatattcat
caaatcgcaaacatttatgggatcgaagcggcgaggagggtgatcgtgaaggaaatgcag
gatgtgttcaaggtctatggcatcgtagtggacccgcgacatcttcttcttgttgcagac
tacatgaccttcaacggaaaatacgaacctttcagtcgaaaaacaattgaagatcacgca
tctccactacagcagatgtcgttcgagtcttctgttaattttctgaagatagcggtaaca
cgggggaagcgagatgaactagtgtcgccatctagtcgcctgatggttggccagcctttt
attgggggaactggttcgttctctctcctgcacaaactttcgattccttga
DBGET
integrated database retrieval system
