Zingiber officinale (ginger): 121967466
Help
Entry
121967466 CDS
T08725
Name
(RefSeq) phytoene synthase 2, chloroplastic-like
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00906
Carotenoid biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
121967466
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
zof01006
]
121967466
Enzymes [BR:
zof01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
121967466
Prenyltransferases [BR:
zof01006
]
Terpene biosynthesis
Squalene/phytoene synthase
121967466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HTH_25
Motif
Other DBs
NCBI-GeneID:
121967466
NCBI-ProteinID:
XP_042373654
LinkDB
All DBs
Position
3B:complement(119980034..119982397)
Genome browser
AA seq
393 aa
AA seq
DB search
MSTLLLASGVLGLTEASQRRRRRRTWRVHSLHAESKPEKSAIIPRAASLAAGQVAVSSEQ
KVYDVVVKQAALVRKQLSSNTSIDQKPETAFPGSPSLLKEAYDRCGEVCAEYAKTFYLGT
LLMTPERRKAIWAIYVWCRRTDELVDGPNASQITPTALDRWGSRLDDVFSGRPYDMFDAA
LSDTVSEFPVDIQPFRDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAP
ESRASTESVYSAALALGIANQLTNILRDVGEDASRGRIYLPQDELARAGLSDEDIFEGKV
TDRWRSFMKNQIERARMFFREAEIGVTELNQASRWPVWASLKLYRQILDEIEANDYDNFT
KRAYVSKAKKLMALPIAYGKSLVRPSSLLQTNM
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactttgctgctagcctctggagttcttggcttaacagaagcttctcagaggagg
aggagaagaaggacgtggcgcgtccactcccttcacgccgaatcgaagcccgaaaagagc
gcgattattcctcgcgcggcgagtctcgccgcagggcaggtggcggtttcctccgagcag
aaggtctacgacgtcgtcgtcaagcaggccgctctggtgaggaagcaactgagctcgaat
acctccatcgaccagaagccggagacggcatttccgggatcgccgagcttgctgaaggag
gcgtacgatcgctgtggcgaagtttgcgcagagtacgccaagaccttttacttgggaaca
ctgctaatgacccccgagaggagaaaggccatctgggcaatctatgtttggtgcagaagg
acagacgagcttgtggacggacccaatgcatcgcaaatcacaccaactgctttagatcga
tgggggtcgaggctggacgatgtgttttcaggcaggccatacgacatgttcgacgcagct
ctgtctgatactgtctcagagttccctgtcgatatccagccatttcgcgacatgattgaa
ggaatgcgcatggacctgaggaaatccagatacaagaacttcgatgaactctatctgtac
tgctattacgtggctggaactgtcgggttgatgagtgttcctgtaatgggcatcgcaccc
gagtcgagggctagcaccgagagcgtgtacagcgcggctttggccttaggaattgctaac
caacttaccaatatacttagagatgtcggcgaagatgctagtagagggaggatttacctg
cctcaggatgagctagctcgggctgggctgtccgatgaggacattttcgaaggcaaggtg
accgatcggtggcggagcttcatgaagaaccaaatcgagagggcgaggatgttcttccga
gaggcagagatcggtgtaaccgaactcaatcaagctagtcgttggccggtttgggcttca
ttgaagttgtataggcaaatcctcgatgagattgaagcaaacgactacgataacttcacg
aagcgagcttatgttagcaaggcgaaaaagctcatggccttgcctattgcatatggaaaa
tctctagttaggccatcttctctgctgcaaactaacatgtga
DBGET
integrated database retrieval system
